Query= MSMg01no046_j24.b1 MSMg01no046_j24.b1 CHROMAT_FILE:
MSMg01no046_j24.b1 PHD_FILE: MSMg01no046_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:49 2005
(666 letters)
>mm_chr13_95821923_95822987
Length = 1065
Score = 1205 bits (623), Expect = 0.0
Identities = 647/655 (98%), Gaps = 2/655 (0%)
Strand = Plus / Plus
Query: 6 gaattcttcaagtgttatctatctaatcattctggaatcaaggaggacgattgtgcatct 65
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 206 gaattcttcaagtgttgtctatccaatcattctggaatcaaggaggacgattgtgcaact 265
Query: 66 gaccagggtctgaccaggtgcccatgctgaagctgatggttggcagccatccttatagga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaccagggtctgaccaggtgcccatgctgaagctgatggttggcagccatccttatagga 325
Query: 126 gaaaacatcctaaggctttaggaatacattccctgtcccctgtctccagtggtcagatag 185
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaaaacatcccaaggctttaggaatacattccctgtcccctgtctccagtggtcagatag 385
Query: 186 ccccaggccttccacaagtagatgtcattgggtcttcctttcatgttgtagataaggaaa 245
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccccaggcctttcacaagtagatgtcattgggtcttcctttcatgttgtagataaggaaa 445
Query: 246 ccaaagatctgagtgttgttcagggtctaaggcaggagtaaggcaggagctgagatgggt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccaaagatctgagtgttgttcagggtctaaggcaggagtaaggcaggagctgagatgggt 505
Query: 306 tggtgtccagcctatttccatttgtaaagtcagtcaccatgtacaactcagagagggaac 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tggtgtccagcctatttccatttgtaaagtcagtcaccatgtacaactcagagagggaac 565
Query: 366 agacataggtggcccatcactgtgttctcagctgtgccctaggtggcctgccttgcctta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agacataggtggcccatcactgtgttctcagctgtgccctaggtggcctgccttgcctta 625
Query: 426 gactccactccgcgctgggctcatctgctctacatgatctctagccaagaaaggaaaaca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gactccactccgcgctgggctcatctgctctacatgatctctagccaagaaaggaaaaca 685
Query: 486 agaaggggaggaatttaggagggaaggccgccacaaacccagagacaagaattgtagagg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agaaggggaggaatttaggagggaaggccgccacaaacccagagacaagaattgtagagg 745
Query: 546 atgcctgctgttcctctgctctccagccctctaatgccagcacttagattttagccatcc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atgcctgctgttcctctgctctccagccctctaatgccagcacttagattttagccatcc 805
Query: 606 ccaatctagggtgacaactgtcatcttgaactccaggtcctac-ccccccccccc 659
||| ||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 806 ccagtctagggtgacaactgtcatcttgaactccaggtcct-ctccccccccccc 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1065
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1055
Effective search space: 692080
Effective search space used: 692080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_j24.g1 MSMg01no046_j24.g1 CHROMAT_FILE:
MSMg01no046_j24.g1 PHD_FILE: MSMg01no046_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:49 2005
(341 letters)
>mm_chr13_95967829_95968569
Length = 741
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 acctggcacttttacatgcttacgtgaaggcagatatggctgttaatatggaatttggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acctggcacttttacatgcttacgtgaaggcagatatggctgttaatatggaatttggct 454
Query: 61 atacagccaacaaagcaaagaagccaggctacagtttcaaaggacccaagggaggtctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atacagccaacaaagcaaagaagccaggctacagtttcaaaggacccaagggaggtctat 394
Query: 121 agagcagtagagcatcccatccccacatttcaaattttccaccttctttcttggattgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agagcagtagagcatcccatccccacatttcaaattttccaccttctttcttggattgag 334
Query: 181 cagtattctcttatgattgacgtgagtatctaagaaaacattctgtttccgtgtaggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cagtattctcttatgattgacgtgagtatctaagaaaacattctgtttccgtgtaggctg 274
Query: 241 gccttccctggttaccatggaaagaataggttttggggttcaaggagacaatttcaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gccttccctggttaccatggaaagaataggttttggggttcaaggagacaatttcaattt 214
Query: 301 tattcaatttatttgtgtgtgtgtgtgtgtgtgtgt-gtgtg 341
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 213 tattcaatttatttgtgtgtgtgtgtgtgtgtgtgtggtgtg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
