MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-048J05
Chromosome	13 (Build37)
Map Location	104,293,331 - 104,293,913
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cd180, Mast4, EG621312, EG432800, LOC432801
Downstream gene	LOC100040045, Ppia-ps13_1282.1, Sfrs12, Erbb2ip, LOC100040086, D130037M23Rik, Nln, Sgtb, 2410002O22Rik, LOC100040518, Trim23, Ppwd1, Cenpk, Adamts6, LOC667518
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cd180 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17079 MGI:1194924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mast4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328329 MGI:1918885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 73 ESTs, 16 Proteins

name	EG621312 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621312 MGI:3646534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs pseudo : _no_value

name	EG432800 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432800 MGI:3648286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 100 ESTs, 21 Proteins

name	LOC432801 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1025 ESTs, 10 Proteins

name	LOC100040045 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ppia-ps13_1282.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606728
definition	note : peptidylprolyl isomerase A pseudogene 13_1282.1 pseudo : _no_value

name	Sfrs12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218543 MGI:2145245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Erbb2ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59079 MGI:1890169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040086 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs

name	D130037M23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328330 MGI:3027005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs

name	Nln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75805 MGI:1923055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgtb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218544 MGI:2444615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410002O22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66975 MGI:1914225
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs, 1 Protein

name	Trim23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81003 MGI:1933161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppwd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238831 MGI:2443069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cenpk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60411 MGI:1926210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Adamts6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108154 MGI:1347348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 330 ESTs, 6 Proteins pseudo : _no_value

name	Cd180 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117320544 GeneID:17079 MGI:1194924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD180 antigen transcript_id : NM_008533.2

name	Mast4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264664 GeneID:328329 MGI:1918885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 73 ESTs, 16 Proteins product : microtubule associated serine/threonine kinase family member 4, transcript variant 1 transcript_id : XM_283179.6

name	EG432800 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264667 GeneID:432800 MGI:3648286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 100 ESTs, 21 Proteins product : predicted gene, EG432800 transcript_id : XM_484312.4

name	LOC432801 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264668 GeneID:432801
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1025 ESTs, 10 Proteins product : similar to ribosomal protein L21 transcript_id : XM_001475281.1

name	LOC100040045 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264649 GeneID:100040045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to hCG1657676 transcript_id : XM_001473995.1

name	Sfrs12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129995 GeneID:218543 MGI:2145245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 12 transcript_id : NM_172592.2

name	Erbb2ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54607111 GeneID:59079 MGI:1890169
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Erbb2 interacting protein transcript_id : NM_021563.2

name	Erbb2ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54607113 GeneID:59079 MGI:1890169
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Erbb2 interacting protein transcript_id : NM_001005868.1

name	LOC100040086 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264653 GeneID:100040086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs product : hypothetical protein LOC100040086 transcript_id : XM_001474060.1

name	D130037M23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264655 GeneID:328330 MGI:3027005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs product : RIKEN cDNA D130037M23 gene transcript_id : XM_001474094.1

name	Nln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28077050 GeneID:75805 MGI:1923055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurolysin (metallopeptidase M3 family) transcript_id : NM_029447.1

name	Sgtb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450230 GeneID:218544 MGI:2444615
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta transcript_id : NM_144838.1

name	2410002O22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385363 GeneID:66975 MGI:1914225
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410002O22 gene transcript_id : NM_025879.1

name	LOC100040518 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264673 GeneID:100040518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs, 1 Protein product : hypothetical protein LOC100040518 transcript_id : XM_001475402.1

name	Trim23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802155 GeneID:81003 MGI:1933161
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 23 transcript_id : NM_030731.2

name	Ppwd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386455 GeneID:238831 MGI:2443069
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase domain and WD repeat containing 1 transcript_id : NM_172807.2

name	Cenpk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802527 GeneID:60411 MGI:1926210
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein K transcript_id : NM_181061.3

name	Cenpk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11140826 GeneID:60411 MGI:1926210
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein K transcript_id : NM_021790.1

name	Adamts6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486613 GeneID:108154 MGI:1347348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 transcript_id : NM_001081020.1

name	Cd180 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117320545 CCDS:CCDS26741.1 GeneID:17079 MGI:1194924
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 note : lymphocyte antigen 78 product : CD180 antigen protein_id : NP_032559.2

name	Mast4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38075057 GeneID:328329 MGI:1918885
definition	codon_start : 1 product : microtubule associated serine/threonine kinase family member 4 isoform 1 protein_id : XP_283179.2

name	EG432800 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51767895 GeneID:432800 MGI:3648286
definition	codon_start : 1 product : similar to ets-related protein ER81 protein_id : XP_484312.1

name	LOC432801 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264669 GeneID:432801
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475331.1

name	LOC100040045 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264650 GeneID:100040045
definition	codon_start : 1 product : similar to hCG1657676 protein_id : XP_001474045.1

name	Sfrs12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369842 CCDS:CCDS26743.1 GeneID:218543 MGI:2145245
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : splicing factor, arginine/serine-rich 12 protein_id : NP_766180.1

name	Erbb2ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54607112 CCDS:CCDS26745.1 GeneID:59079 MGI:1890169
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : Erbb2 interacting protein isoform 2 protein_id : NP_067538.2

name	Erbb2ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54607114 CCDS:CCDS26744.1 GeneID:59079 MGI:1890169
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006605 - protein targeting [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : Erbb2 interacting protein isoform 1 protein_id : NP_001005868.1

name	LOC100040086 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264654 GeneID:100040086
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474110.1

name	D130037M23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264656 GeneID:328330 MGI:3027005
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474144.1

name	Nln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077051 GeneID:75805 MGI:1923055
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : neurolysin (metallopeptidase M3 family) protein_id : NP_083723.1

name	Sgtb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450231 CCDS:CCDS26746.1 GeneID:218544 MGI:2444615
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta protein_id : NP_659087.1

name	2410002O22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229027 GeneID:66975 MGI:1914225
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66975 protein_id : NP_080155.2

name	LOC100040518 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264674 GeneID:100040518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475452.1

name	Trim23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789263 CCDS:CCDS26747.1 GeneID:81003 MGI:1933161
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0000139 - Golgi membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005765 - lysosomal membrane [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0019003 - GDP binding [Evidence ISS]; GO:0005525 - GTP binding [Evidence ISS] [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016567 - protein ubiquitination [Evidence ISS]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : tripartite motif protein TRIM23; ADP-ribosylation factor domain protein 1, 64kD product : tripartite motif protein 23 protein_id : NP_109656.1

name	Ppwd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370202 CCDS:CCDS26748.1 GeneID:238831 MGI:2443069
definition	GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : peptidylprolyl isomerase domain and WD repeat containing 1 protein_id : NP_766395.1

name	Cenpk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11140827 CCDS:CCDS26749.1 GeneID:60411 MGI:1926210
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; SoxLZ/Sox6 leucine zipper binding protein in testis product : SoxLZ/Sox6 leucine zipper binding protein in testis isoform 1 protein_id : NP_068562.1

name	Cenpk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30840994 CCDS:CCDS26750.1 GeneID:60411 MGI:1926210
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; SoxLZ/Sox6 leucine zipper binding protein in testis product : SoxLZ/Sox6 leucine zipper binding protein in testis isoform 2 protein_id : NP_851406.1

name	Adamts6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486614 GeneID:108154 MGI:1347348
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 6 protein_id : NP_001074489.1

name	EG621312 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94395616 GeneID:621312 MGI:3646534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG621312 pseudo : _no_value transcript_id : XR_002190.1

name	LOC667518 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264677 GeneID:667518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 330 ESTs, 6 Proteins product : similar to ribosomal protein L32 pseudo : _no_value transcript_id : XR_032338.1

clone name	MSMg01-460O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399J12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-541I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-048J05.T7 (MSMg01no048_j05.b1)	MSMg01-048J05.TJ (MSMg01no048_j05.g1)
ACC	AG278308	AG278309
length	1,251	1,829
length of high quality (start - end)	610 (76 - 685)	---
definition	CHROMAT_FILE: MSMg01no048_j05.b1 PHD_FILE: MSMg01no048_j05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:40 2005	CHROMAT_FILE: MSMg01no048_j05.g1 PHD_FILE: MSMg01no048_j05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:41 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NTTCATTGGGCCTATAGACTCCTAAGGGAGAGGATCCGCGGAATTCTTCT TGATTGACTCTTCGTATAAACTTACATTCCTTGGGNCTTTCTATATTGAA TACTTTGAAATGTGCCTTACCAATGTGGTGTGTTCTGTGTAGACTTTAGT TAAAGTCCAGGGAACATAAGCAAACTTACCAGGTTACACTATAGACACTG TTTCTCATTTTTCTGGGAGTAATTTCAATCCGAATTCAGTTTTCAAACTC CTCACTTGGCTGTTTCACGTCTGGTCTGCCCATTAGTTCAAGGACTAATC TAAGTCTCAGGCAGACATTAAAATCTTAGTTCAACATTCAGTTTTCTCTA GGCTTCCTTGTGTCTCTTGCACATGTGGTTGTAGAGTCGGTTATTTGCTT CTACAGGCTCACACAGGAAATTCAGTTATATATTATTGAATTTTATTATA TATCCTGGTTTATCTCCTGAATTGTATTGGTTAATGTACTTGCTGGTTGT ATGTGTCAACTCGACACAAGCTAGAGTCATCAGAGAGAAGGGCCCCCAGC TGAGGAAATGCCTCCGCGAGATCCAGTAATAAGGCATTTTCTCAATCAGT GATCAATCTGGGAGGGCCCAGCACATTGTGGGTGGTGCCATCCCTGGGCT GATAGCTCTGGGTTCTATATGAAAGCAGGCAGAGTAAACCATGAGCAAGT AAACCAGTATGCAGCCCCCCTTTCATGGCCTCTGCATCAGTTCCTGCTTC CAGTTTCCTGCCCTGTTTGACTTCCTGCCCTGATGCTCTTTGTGTTGAGC ATCTTACGTGGAAATGGAAGTGTTGGTTCTTTGCTGCATTAACAACTCTA ATACCTTCTTGCTAAACATTGTGTACCTGTTTGTTCATAAAAATGGTGCA CTATTTAATAACTTTTACTGTTTCTTCATATAACCTGATTTTGGTTCCAA CATCCTTTGTCATGTGTCTCATAACTGCCTTATAAATTCTGATTCCGTGA TTCCAATCCTTTCTTGTTTCTTGTGACATGTTATCCTTAACTTTTTGATA AATTTTGGTATATAATATATTAATTTTTTAACTGATTTTGAATCTTGTTC CTTGTTTTATTTTTCCTAACCTCTCTATTTTCTAACCGTTGTGTGTTAAA AAAATGTTTATTCTCTTACTTATTTGTTTTCTTTCTTCCTTCCTCTAAAT AATTCCTTTTTATCTCTTTTCTTTTCTAATAACTCTCTCTCTTTTCATAT A	AGAAACCCTATATAAAAGAGGCTCCTGTNNNNNANGGNNANGANAANNNN NNNATAGTTNNTAGAGACCCCCTTTAAAAAGGGGATGCTTGCCACCCCAC GTTGTTGTGATAGAGGATGTGTTCATAATATAGATGTAGTTGAGTAAGTG GTCTCACTTGATAGTTCTGAGAATGGGTATGATGTGCTGTAATGTTCATT GAGAGAGTAAGGGATATGTGTACGGTGGAAGAAACCGGTATTAAGTAGAT GCAATCATGCTGGAGAGTCAGAGACGGAAAAGAAAGTGATAATGTTGAGA TACAGAGAGTAAGGATTAGAAAATATAAAGTGGCAATGGTGAGTATTACA AGAAGGGAGATTTATATATACTTGATATTTTGTGCGCTATGTTGTTTTTT AGTGTGCTGTTGTGTAACATATAAAAGTCGTAAGAATGGTATTGTGTTTT AGATTTAATTCTAGGAGAGATGTCTTGAAATAGTGATAAAGGACTTTTTT TTTTTTTTTTGAAAGGGAGTTGTACTGAGGTACAAGTTTACTTGTATTGG GGTGCGTTTGATAATGTACCTCACCTCCTGTTGTTGTTAGTATATTTTCC GATTAAGATGTAGAGGAGATATGTGATGTTAATATGTAGTATAAAATAGT AAAAATTGTTTTGAAAGATTCATTATATGTATATAGTTGAATTAGCTATT GTTATGTGATTTAGATTGTGTTATTTGCTTGTCTATGATTCAATATTTGA TTGTGTTTATTATTGACAAAGTTAGAAATTAGGTAGGATGGTATTCTAAT AAGTTATATGTAAATGGTGATGACCCCGGAATAAGTAGTAAGGATTATGA TGGGATGTGATTGGTGTTGTAAAATATTGTAAGTTTATAATAAGTGTGGT AAAGATTAGTATAAATTGGAATATTGAAGTAGAAGATGTTACGATAATAA ATGTAGTTGTTTATTTATTAATATTTGAAGTGATAGGATGATATGATGAT GTGTTCAGGTAAGGAATGAAAAAAAGAAGGAATAGAGATTGGTGTTAGGA ATTTCAATATTATGTTAAGTGGATGGAAAGTATTGGGGTGTGAGTAATTT GATAGAGTGAGTACAATTATATAATTTCATAGTATCTAATAATATAATAT AGTTAGATGAGAGATTGAGTGGATAACAGTAATGTAATGTTTCCAGGATG AATGTGAGAATTGTAGTGTAGGTATATTAATTTATGGAGTTTAAAGTAAT TGCTAACAGATGTTATGTGTTATATAGTGTGTGTATGTGTCATATTATAT ATTTGTAGTAGTTTATATGTGATTATTGTTTATGTAATAATAGAATGATA TGGTGTATTGGTGTAAGGTGTCGTAGTTGCGAGTGAATGTCATTATCTGT GATATATTCGCTTGAAGTAGATGTTATTCGTAAATGTTGTATGAATAATG ATGATTTATTATGTTATGATGTATGTAACATATTGTGATATGAGGTGAGA TAGAAGAGATGAATATGTTGATAGGGAATTATTATTAATTGTATTATATA TGGTAGTGGTATGAGAANAGTAGAGTAACTATGAAGAGTTGGATTATAAG AGCTGAAAGTGTATGTTAAGTTGATGAAGATGACAGATATATACGATTAA TTATGAGATAGTATTATATAGGTAGTNGATGTGTAGATGAGTTAGAGTGC TGATCTGATAGATGAGAATGATGAGGNTGGTTATAGAGTACGAGTATGTA TGAGTATATATGTCATAGTATATTAATGTAGTAGTAATACATGATANTGA TGTAGAGTGTGGGAGTGATGAAGAGATTA
quality values	Open. Hide. 0 3 12 9 9 9 10 12 9 9 8 8 8 8 8 8 8 13 19 10 8 8 8 8 8 19 21 36 36 36 36 36 33 33 37 37 41 37 37 32 28 23 23 28 37 37 59 59 50 50 50 50 50 50 50 47 47 27 27 12 7 7 7 7 7 6 9 12 10 16 12 18 12 12 11 15 15 41 41 33 33 33 21 21 3 0 3 25 25 37 37 37 37 37 39 50 47 37 27 17 10 10 11 12 14 16 15 15 24 25 32 36 36 36 37 37 31 24 19 20 19 30 31 43 43 43 50 57 50 50 50 50 50 68 68 68 48 48 42 42 36 39 43 57 54 50 32 32 19 19 25 34 43 48 54 54 57 57 57 54 57 59 57 57 47 47 48 48 37 37 43 43 43 48 48 57 57 57 59 57 54 54 47 57 57 57 50 50 50 43 43 43 44 44 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 44 44 33 33 43 44 57 68 68 68 68 68 57 57 52 52 52 59 59 57 57 57 57 57 68 68 68 57 57 59 57 57 59 59 68 68 68 68 68 57 57 52 52 52 57 57 57 57 57 59 57 57 57 57 68 68 57 44 43 35 35 35 59 44 59 54 54 50 59 43 43 43 59 59 59 59 41 41 33 42 42 57 44 57 57 57 57 57 57 57 57 57 59 59 59 68 44 44 30 32 39 59 59 68 68 68 68 68 68 68 59 68 68 68 59 59 59 59 59 59 68 68 59 59 59 57 57 57 57 44 43 39 39 32 39 41 57 59 59 59 59 59 59 59 46 46 23 27 11 15 11 14 11 11 11 15 33 34 47 47 39 43 36 39 39 43 44 57 57 57 57 57 57 57 50 50 48 57 57 48 48 59 59 47 59 39 43 43 59 59 68 59 59 48 47 39 35 35 35 37 37 43 59 59 59 68 68 68 68 59 59 43 42 32 42 42 43 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 48 48 59 59 57 54 54 59 59 59 59 59 59 59 57 57 57 57 57 59 59 57 57 57 57 57 57 57 38 38 13 13 12 27 24 27 11 11 11 24 24 41 20 20 18 38 24 33 33 27 32 20 20 17 20 20 39 39 35 33 32 32 33 38 43 28 26 11 11 11 27 27 23 23 20 32 32 35 43 42 42 57 59 44 43 27 18 21 30 30 43 57 57 52 52 52 43 43 43 43 44 43 43 37 37 37 57 44 57 48 44 42 47 42 44 41 36 22 22 20 25 38 32 36 20 20 23 37 32 27 17 17 32 32 25 25 25 28 38 36 44 48 57 59 59 44 37 21 21 29 27 33 33 25 25 30 42 32 32 23 23 32 40 34 43 43 36 35 35 39 40 40 43 39 47 40 43 47 39 39 30 30 33 37 40 41 47 47 44 41 39 25 25 24 28 24 28 28 32 28 23 23 15 19 15 12 12 18 18 16 23 18 23 11 12 12 18 17 12 12 12 20 16 20 20 19 15 17 11 11 11 13 15 15 11 11 12 19 19 19 18 18 19 19 15 10 8 8 8 8 10 13 26 23 23 23 15 23 10 11 10 20 12 15 19 14 14 17 24 19 10 10 10 9 9 19 29 30 15 13 12 26 27 37 47 32 32 24 24 24 25 24 25 25 25 25 31 18 18 10 10 10 13 12 22 10 10 10 10 21 21 26 18 15 16 14 17 14 12 13 12 13 13 24 20 19 10 10 11 10 10 10 8 8 8 10 10 10 11 8 13 6 6 8 6 8 8 8 8 8 8 13 15 16 16 11 10 14 9 10 10 8 8 8 10 15 14 17 8 8 8 8 13 15 13 16 11 13 12 18 11 10 10 10 16 18 13 21 21 12 12 11 16 12 10 10 10 9 7 7 8 10 8 8 9 10 10 16 19 21 13 11 11 11 9 9 12 12 8 8 8 7 6 8 15 15 15 15 10 8 8 8 8 8 10 10 11 11 11 11 11 9 9 9 9 15 9 10 10 8 8 8 8 8 9 12 10 10 14 17 19 16 13 10 10 10 10 8 8 11 10 10 11 11 10 10 10 10 14 13 14 12 10 10 11 9 8 8 8 10 8 8 11 10 10 10 10 10 9 9 15 9 9 8 10 8 10 10 6 6 6 6 8 8 10 8 8 8 8 8 8 9 15 9 8 8 6 6 8 10 9 8 8 8 9 12 10 10 14 13 8 8 8 8 8 8 8 8 8 12 8 8 8 8 10 8 10 7 7 8 8 12 16 13 10 10 10 9 10 9 9 9 11 17 17 11 11 11 11 9 9 11 12 12 12 12 11 11 8 8 7 6 8 8 15 15 17 19 12 12 11 10 8 8 8 8 8 10 9 9 9 10 10 12 17 11 11 10 10 8 6 6 8 8 8 12 10 10 10 8 8 13 13 10 11 9 8 8 6 6 8 6 6 8 8 8 10 13 11 11 8 12 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 11 13 10 8 6 6 8 6 6 8 8 9 9 9 8 8 6 6 8 6 8 9 13 9 8 8 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 11 11 8 8 6 6 6 6 8 8 8 10 10 14 8 8 7 7 13 13 9 8 8 8 9 9 10 9 10 10 10 8 8 8 8 11 8 6 8 8 6 6 7 11 15 8 8 8 8 8 8 8	Open. Hide. 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 9 9 3 0 0 0 0 0 3 0 3 3 0 0 3 0 3 3 0 3 3 0 0 0 0 0 0 0 3 10 11 15 13 3 0 0 3 9 10 8 8 6 6 7 7 8 6 6 6 6 6 6 7 9 9 9 9 9 6 6 6 6 8 8 12 12 10 8 8 8 8 8 10 9 9 11 15 12 12 10 10 9 9 8 8 8 8 8 10 10 13 8 9 9 9 9 10 8 8 8 8 8 8 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 10 9 9 8 8 8 8 8 7 7 8 9 8 8 6 6 6 6 8 8 6 6 8 10 12 12 10 8 8 7 6 8 6 6 8 8 8 8 8 10 10 8 8 11 10 9 8 8 6 6 8 8 10 8 8 6 6 8 8 10 12 10 8 8 8 8 8 11 12 11 11 11 11 11 15 11 10 10 10 9 9 8 8 8 8 8 8 8 11 11 7 6 6 6 6 8 8 8 8 6 6 6 6 8 6 6 6 6 6 10 7 7 8 10 10 10 6 7 10 8 6 6 6 6 8 8 10 6 6 7 6 8 8 8 8 8 8 8 12 13 10 8 8 8 8 8 8 8 8 8 8 8 6 6 7 7 7 8 8 8 8 8 8 13 8 6 6 6 8 6 9 10 10 10 10 10 9 9 9 10 9 6 8 6 6 8 8 8 8 8 8 8 8 6 6 6 7 10 6 6 8 8 8 8 10 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 10 10 13 13 10 10 10 11 11 9 9 9 9 9 7 8 8 9 14 10 12 15 15 18 15 11 9 9 9 10 10 10 10 12 12 12 12 11 11 8 8 8 8 10 11 10 10 8 8 8 6 6 6 6 8 8 8 6 8 6 6 8 8 10 8 8 8 10 10 10 9 9 9 9 8 8 8 8 8 8 11 11 12 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 8 9 12 11 11 8 8 6 6 8 8 9 10 11 13 10 10 10 8 8 8 8 10 8 17 15 15 19 23 18 12 12 15 12 10 8 8 8 10 8 10 8 8 6 6 6 6 8 8 10 10 10 9 9 9 9 10 9 9 10 10 8 8 8 8 6 6 8 10 9 10 10 8 8 10 8 8 8 10 9 8 8 6 6 8 8 8 8 10 8 10 9 8 8 8 9 8 8 8 6 6 6 6 6 10 15 19 13 15 11 8 8 10 8 8 8 8 6 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 10 10 10 10 9 8 8 6 6 8 6 6 8 6 6 8 8 10 10 8 8 8 8 8 8 8 8 10 10 8 8 6 6 8 8 7 7 8 8 8 8 8 8 8 9 9 12 12 12 12 12 11 13 14 15 10 10 9 8 8 8 10 8 12 10 8 8 7 7 8 8 8 8 6 6 8 8 8 8 8 8 10 10 14 14 14 16 8 8 6 6 6 8 8 8 8 6 6 8 8 6 6 10 8 10 8 9 9 13 12 9 8 8 8 8 8 6 6 8 6 11 12 8 8 8 8 8 8 11 11 9 9 8 8 6 6 8 8 12 12 12 10 10 13 13 11 11 12 12 12 11 10 8 8 8 8 8 8 8 6 7 8 8 10 10 10 10 11 12 8 8 8 8 8 8 8 8 8 8 10 7 7 8 8 8 8 6 6 8 8 8 10 8 8 8 8 8 8 8 8 10 12 8 8 8 9 9 10 9 10 10 10 9 15 10 8 6 6 7 6 6 6 6 6 8 8 8 8 8 8 8 8 8 13 11 8 9 9 9 9 10 11 8 8 6 6 8 8 8 8 8 6 6 8 8 11 10 9 9 10 9 9 9 10 10 10 10 10 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 13 13 12 8 8 8 8 8 8 9 9 9 10 10 10 8 8 8 8 10 6 6 8 8 8 11 16 11 8 8 6 6 8 8 8 6 6 8 8 9 9 8 8 6 6 8 8 10 9 10 8 8 6 6 8 8 8 10 10 10 10 12 9 10 9 9 9 14 14 10 10 10 8 8 8 8 6 6 8 8 8 10 11 10 10 14 10 10 9 9 11 11 11 8 10 7 6 8 8 8 8 8 7 9 9 9 8 8 6 6 8 8 8 8 6 6 8 8 10 8 8 6 6 8 8 9 9 12 11 11 11 11 12 11 11 8 8 6 7 8 8 8 6 6 8 8 8 7 6 8 8 8 6 6 8 8 6 6 8 8 8 9 10 10 8 8 8 9 9 11 11 12 11 12 12 9 8 8 8 8 8 9 9 9 9 8 8 8 8 8 8 8 8 6 6 8 8 10 9 9 6 6 6 6 8 8 8 8 8 8 8 8 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 9 11 8 8 6 7 7 10 8 8 8 8 8 8 8 10 8 8 8 10 10 12 10 9 8 8 8 10 10 13 10 13 9 9 6 8 8 8 8 8 8 12 10 8 8 8 8 8 9 9 9 9 9 9 12 11 12 12 15 10 10 10 10 9 9 10 10 10 12 8 6 6 8 8 8 6 6 8 8 10 10 8 8 8 8 6 6 6 6 8 8 6 6 8 8 8 8 8 8 10 8 8 8 12 8 8 8 8 10 8 8 8 6 6 8 6 8 8 8 8 8 8 7 7 10 10 6 6 8 8 8 8 9 9 9 9 9 20 12 14 14 15 13 10 10 10 10 8 8 7 7 6 6 8 8 10 14 16 12 12 12 12 12 13 11 8 8 8 11 8 8 8 10 11 12 8 6 6 8 8 8 9 10 16 12 12 13 15 12 12 8 8 6 6 8 8 8 8 8 7 7 8 8 9 9 10 10 11 11 11 11 14 11 11 8 8 6 7 10 10 8 8 8 8 9 8 10 10 8 8 8 8 8 8 10 10 11 11 11 11 11 12 12 8 8 6 6 6 6 8 10 10 9 7 8 8 9 9 9 9 9 9 8 10 10 8 8 8 10 10 8 10 10 9 11 11 10 10 12 11 8 8 11 10 8 6 6 8 8 11 6 7 7 6 8 8 9 10 10 8 8 8 8 8 8 11 15 15 14 9 10 10 8 8 8 6 6 8 8 10 10 9 10 10 9 9 8 8 8 8 8 8 8 8 8 8 10 9 9 9 11 13 10 11 11 10 8 9 9 12 13 10 8 8 8 8 8 8 8 8 10 10 8 8 8 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 7 7 8 8 15 8 8 8 10 10 8 8 8 8 8 8 8 10 8 8 7 6 8 8 8 7 6 8 6 6 6 6 6 7 10 11 7 7 8 8 10 8 6 6 6 8 8 10 8 8 8 8 9 8 8 8 8 6 6 8 8 3 0 3 8 6 7 10 10 10 8 8 7 7 7 10 9 10 10 10 11 9 9 9 11 11 11 10 9 8 8 6 6 8 8 11 9 8 8 6 6 8 8 8 8 8 8 8 8 6 6 10 8 10 10 10 9 9 10 10 11 10 10 10 10 10 8 8 6 6 8 8 8 8 8 10 10 7 6 6 6 8 8 10 8 8 8 10 8 8 8 8 6 6 6 6 8 6 6 6 6 6 6 8 8 8 7 7 8 8 3 0 3 8 8 8 10 12 8 8 8 12 12 16 8 8 7 7 8 9 9 9 8 8 8 6 8 6 6 6 6 10 10 11 11 8 7 9 11 12 13 9 9 9 9 10 10 10 10 10 3 0 3 6 8 8 6 6 6 6 8 8 9 8 6 6 6 8 8 7 7 12 12 12 9 9 9 8 17 11 8 9 11 10 10 7 7 7 8 8 8 6 8 6 6 8 6 8 8 8 10 8 8 7 7 10 12 10 10 9 8 10 8 8 8 8 8 10 8 8 3 0 3 8 7 9 12 12 14 18 17 13 13 8 10 8 8 8 8 8 10 8 6 6 6 6 6 10 10 8 8 10 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no048_j05.b1 MSMg01no048_j05.b1 CHROMAT_FILE:
MSMg01no048_j05.b1 PHD_FILE: MSMg01no048_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:40 2005
         (610 letters)



>mm_chr13_104293131_104294136
          Length = 1006

 Score =  905 bits (468), Expect = 0.0
 Identities = 563/615 (91%), Gaps = 37/615 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   attccttgggnctttctatattgaatactttgaaatgtgccttaccaatgtggtgtgttc 60
           |||||||||| |||||||||||||||| |||| ||||||||||| |||||||||||||| 
Sbjct: 201 attccttgggtctttctatattgaataatttggaatgtgccttaacaatgtggtgtgttt 260

                                                                       
Query: 61  tgtgtagactttagttaaagtccagggaacataagcaaacttaccaggttacactataga 120
           |||||||||||      |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgtagactt------aagtccagggaacataagcaaacttaccaggttacactataga 314

                                                                       
Query: 121 cactgtttctcatttttctgggagtaatttcaatccgaattcagttttcaaactcctcac 180
           ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 315 cactgtttctcatgttt-tgggggtaatttcaatccgaattcagttttcaaactcctcac 373

                                                                       
Query: 181 ttggctgtttcacgtctggtctgcccat-t--agttcaaggactaatctaagtctcaggc 237
           |||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||
Sbjct: 374 ttggctgtttcacgtctggtctgcccatgtacagttcaaggactaatctaagtttcaggc 433

                                                                       
Query: 238 agacattaaaatcttagttcaacattcagttttctctaggcttccttgtgtctcttgcac 297
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 434 agacattaaaatcttagttcaacattcagttttctctaggcttccttgcgtctcttgcac 493

                                                                       
Query: 298 atgtggttgtagagtcggttatttg--cttctacaggctcacacaggaaattcagttata 355
           |||||||||||||||||||||   |  ||||||||||||||||| |||||||||||||||
Sbjct: 494 atgtggttgtagagtcggtta--agcacttctacaggctcacacgggaaattcagttata 551

                                                                       
Query: 356 tattattgaattttattatatatcctggtttatctcctgaattgtattggttaatgtact 415
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 552 tattattgaattttattatatatcctggtatatctcctgaattgtattggttaatgtact 611

                                                                       
Query: 416 tgctggttgtatgtgtcaactcgacacaagctagagtcatcagagagaagggcccccagc 475
           ||||||||||||||||||||| ||||||||||||||||||||||||||            
Sbjct: 612 tgctggttgtatgtgtcaacttgacacaagctagagtcatcagagaga------------ 659

                                                                       
Query: 476 tgaggaaatgcctccgcgagatccagtaataaggcattttctcaatcagtgatcaatctg 535
                      ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 660 -----------ctccgtgagatccagtagtaaggcattttctcaatcagtgatcaatctg 708

                                                                       
Query: 536 ggagggcccagcacattgtgggtggtgccatccctgggctgatagctctgggttctatat 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ggagggcccagcacattgtgggtggtgccatccctgggctgatagctctgggttctatat 768

                          
Query: 596 gaaagcaggcagagt 610
           |||||||||||||||
Sbjct: 769 gaaagcaggcagagt 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1006
Length adjustment: 10
Effective length of query: 600
Effective length of database: 996
Effective search space:   597600
Effective search space used:   597600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information