Query= MSMg01no050_d10.b1 MSMg01no050_d10.b1 CHROMAT_FILE:
MSMg01no050_d10.b1 PHD_FILE: MSMg01no050_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:13 2005
(336 letters)
>mm_chr13_69149136_69149871
Length = 736
Score = 642 bits (332), Expect = 0.0
Identities = 335/336 (99%)
Strand = Plus / Minus
Query: 1 ttattaaaaaacgtggctcctttgtcattactctgtttggtttttgtggggtttttttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttattaaaaaacgtggctcctttgtcattactctgtttggtttttgtggggtttttttgt 477
Query: 61 agctatacttacgaaattcctctcaaatgtttttgaaatactagaaccagaactcccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agctatacttacgaaattcctctcaaatgtttttgaaatactagaaccagaactcccttt 417
Query: 121 gtccagcctgtaactattcaatgccctttgtccagcctgtaactattcaatggagatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtccagcctgtaactattcaatgccctttgtccagcctgtaactattcaatggagatctt 357
Query: 181 aatcctaaacattacaaattcactagataatcgactgcattttcactaactcccattatg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 356 aatcctaaacattacaaattcactagataatcgactgcattttcagtaactcccattatg 297
Query: 241 ctgagtcaaaattgatctttcttcagtctcaacttgatgccttttaacattttaccagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctgagtcaaaattgatctttcttcagtctcaacttgatgccttttaacattttaccagca 237
Query: 301 aagtatctctagctggctttcatctcatgttagctc 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 aagtatctctagctggctttcatctcatgttagctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_d10.g1 MSMg01no050_d10.g1 CHROMAT_FILE:
MSMg01no050_d10.g1 PHD_FILE: MSMg01no050_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:13 2005
(447 letters)
>mm_chr13_69049445_69050291
Length = 847
Score = 826 bits (427), Expect = 0.0
Identities = 442/447 (98%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 1 gttctcattccctaaaatcagggctttatataccccatccagaattctacgacaggccca 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 gttctcattccctaaaatcagggctttatataagccatccagaattctacgacaggccca 260
Query: 61 acttgaccatccccaactacttacgaagacacatatataattgtgtaaattgatgagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttgaccatccccaactacttacgaagacacatatataattgtgtaaattgatgagtga 320
Query: 121 gtcctttgtggtgtcgattataatacaatactatcttgtttatttgggtgttcaaattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcctttgtggtgtcgattataatacaatactatcttgtttatttgggtgttcaaattct 380
Query: 181 cccagctttgatttttattcagggtgcaagtgagtacttagaagcaaagaaaccaaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccagctttgatttttattcagggtgcaagtgagtacttagaagcaaagaaaccaaatag 440
Query: 241 catctctacagaaacagccgtgtcagagggacacagccacaaaataacagttgatagtcc 300
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 catct-tacagaaacagccgtgtcagagggacagagccacaaaataacagttgatagtct 499
Query: 301 tttcaataccttttcttcatctcttatgataatcaaagttgaggggttttttttgagata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttcaataccttttcttcatctcttatgataatcaaagttgaggggttttttttgagata 559
Query: 361 taatagaaaaagttattatctttatttattattataaatagactaggtcccttcatatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taatagaaaaagttattatctttatttattattataaatagactaggtcccttcatatct 619
Query: 421 atttcacatatttgtatttgtgtgtat 447
|||||||||||||||||||||||||||
Sbjct: 620 atttcacatatttgtatttgtgtgtat 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
