Query= MSMg01no051_c09.b1 MSMg01no051_c09.b1 CHROMAT_FILE:
MSMg01no051_c09.b1 PHD_FILE: MSMg01no051_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:25 2005
(321 letters)
>mm_chr13_17589156_17589880
Length = 725
Score = 491 bits (254), Expect = e-143
Identities = 275/284 (96%), Gaps = 4/284 (1%)
Strand = Plus / Minus
Query: 42 tctccttccccctctccttccctctctatattcttccctccttctattctttttccattc 101
|||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 525 tctccttccctctctccttccctctctctattcttccctccttctatcctttttccattc 466
Query: 102 cttctttccttcattttcccaccttctctaggtgggaaatctagataaatctaggataga 161
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctcctttcctccattttcccaccttctctaggtgggaaatctagataaatctaggataga 406
Query: 162 c----taaagttaccctcattggtttgtgaattttgtatttgaatctgtgagaaaagaac 217
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctatttaaagttaccctcattggtttgtgaattttgtatttgaatctgtgagaaaagaac 346
Query: 218 caacaactcaaatgccaggcagggtagtggtggcacactcctttaatcttaacaccaggg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 caacaactcaaatgccaggcagggtagtggtggcacactcctttaatcttaacaccaggg 286
Query: 278 aggaagaggcatatggagctttgagtttgaggccagtctacaga 321
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aggaagaggcatatggagctttgagtttgaggccagtctacaga 242
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 725
Length adjustment: 9
Effective length of query: 312
Effective length of database: 716
Effective search space: 223392
Effective search space used: 223392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_c09.g1 MSMg01no051_c09.g1 CHROMAT_FILE:
MSMg01no051_c09.g1 PHD_FILE: MSMg01no051_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:25 2005
(319 letters)
>mm_chr13_17389424_17390142
Length = 719
Score = 547 bits (283), Expect = e-160
Identities = 310/319 (97%)
Strand = Plus / Plus
Query: 1 caaagggaattcctgattctgcagacttcccctgaatcctactgtggcccacatggaaat 60
||||||||||||||||||||||||||||| | |||||||||||||||| | ||||||||
Sbjct: 201 caaagggaattcctgattctgcagacttcacatgaatcctactgtggcaaagatggaaat 260
Query: 61 agtcactgccaaggaaaattcttggaagattatgaaccacagtacgaaatccatatgtct 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 agtcactgccaaggaaaattcttggaagattatgaaccacagtaggaaatccatatgtct 320
Query: 121 actgaggagcacacacttgtaaaagtctggtaatgcctcagttcccagtttggggtgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgaggagcacacacttgtaaaagtctggtaatgcctcagttcccagtttggggtgtca 380
Query: 181 aattgagtgcaggaactgagtttcttatgagtccatcatgcccagagtttatttttagtt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 aattgagtgcaggaactgagtttcttatgagtccatcatgcctagagtttatttttagtt 440
Query: 241 tattttaagagttatctgtactgctagttcattctcagaaatgtagccctagtttgacat 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tattttaagagttatctgtactgctagttcattctcagaaatgcagccctagtttgacat 500
Query: 301 attctaaagatgaccatat 319
||||||||||||| |||||
Sbjct: 501 attctaaagatgagcatat 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
