Query= MSMg01no052_a18.b1 MSMg01no052_a18.b1 CHROMAT_FILE:
MSMg01no052_a18.b1 PHD_FILE: MSMg01no052_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:32 2005
(635 letters)
>mm_chr13_56332513_56333547
Length = 1035
Score = 1125 bits (582), Expect = 0.0
Identities = 625/650 (96%), Gaps = 19/650 (2%)
Strand = Plus / Plus
Query: 1 cactccatcatctgcctcagtttccacccagccttgaccccaggtctgtatgtcaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cactccatcatctgcctcagtttccacccagccttgaccccaggtctgtatgtcaaacca 245
Query: 61 cttcttcctgctttttgttaatcattagagctaagtctcaccctagatccaggctgatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cttcttcctgctttttgttaatcattagagctaagtctcaccctagatccaggctgatct 305
Query: 121 cagcctcagagcctttgttaagtcctcagagatcccacggtcaatcaagggcacacttac 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 306 cagcctcagagcctttgttaagtcctcagagatcccatggtcaatcaagggcacacttac 365
Query: 181 tgtgccaaggtaaaggatgtggctgtcacctaatgaggtcaccatagaacaaaaccatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgtgccaaggtaaaggatgtggctgtcacctaatgaggtcaccatagaacaaaaccatga 425
Query: 241 cagccaccatttatgggtgggtcttcccatagtcttcttttatgctctcttcctctctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cagccaccatttatgggtgggtcttcccatagtcttcttttatgctctcttcctctctca 485
Query: 301 cactctctccctccctttccttcattccg-----------------tctcttgctctgct 343
|||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 486 cactctctccctccctttccttcattcctccatttccttcattccatctcttgctttgct 545
Query: 344 ccttgcttccctctctttctccacaccctactctctagtcagggtctcactctgcagccc 403
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 546 ccttgcttccctctctttctccccaccctactctctagtcagggtctcactctgcagccc 605
Query: 404 aggttctcttgaacctgcatccctcctgcattcaactttccaggttctgtgattacaagc 463
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 606 aggttctcttgaacctgcatccctcctgcattcacctttccaggttctgtgattacaagc 665
Query: 464 attgccccacacccagctcaaaaatgacatttctaagtccatccatgttgatgttcatca 523
|| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 666 at-gccccacacccagctcaaaa-tgacatttctaagtccatccatattgatgttcatca 723
Query: 524 ctctaggtaacttacgcaagatgcccccattgcgtgctggtacgacaatgtatatatagt 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctctaggtaacttacgcaagatgcccccattgcgtgctggtacgacaatgtatatatagt 783
Query: 584 cctgaaaatgaaaattctagttatttccactttgaggatattattttctt 633
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cctgaaaatgaaaattctagttatttccactttgaggatattattttctt 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_a18.g1 MSMg01no052_a18.g1 CHROMAT_FILE:
MSMg01no052_a18.g1 PHD_FILE: MSMg01no052_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:33 2005
(626 letters)
>mm_chr13_56415748_56416776
Length = 1029
Score = 1201 bits (621), Expect = 0.0
Identities = 626/629 (99%), Gaps = 3/629 (0%)
Strand = Plus / Minus
Query: 1 cttaaagggacatgacatcagaagacccaggcaggggccaaggcgaggtatgggccactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 cttaaagggacatgacatcagaagacccaggcaggggccaaggcgaggtatgggccactg 770
Query: 61 aggcccatggttgtatttcttccccgttttccttgaagcccatttgacttaatcggtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aggcccatggttgtatttcttccccgttttccttgaagcccatttgacttaatcggtaga 710
Query: 121 gacccaaggagactgatcacatgcaagatcccacccgggtcgggtccttctgctcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gacccaaggagactgatcacatgcaagatcccacccgggtcgggtccttctgctcagctg 650
Query: 181 tgtctctgttacccacagcccccgactgtaagacctgaataaacacagtggtatttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgtctctgttacccacagcccccgactgtaagacctgaataaacacagtggtatttaaga 590
Query: 241 ttgtatgactgaccaacaaaaggaccagtatgtgtctgggggcctggctctttacccaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttgtatgactgaccaacaaaaggaccagtatgtgtctgggggcctggctctttacccaga 530
Query: 301 acactgcctgtcagggtgtgatggttgcaaagctcagactagagggaacagggaagggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 acactgcctgtcagggtgtgatggttgcaaagctcagactagagggaacagggaagggca 470
Query: 361 ctttccaacatcaataaagcaaacattctacagagtaaccacacatacccccggggactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctttccaacatcaataaagcaaacattctacagagtaaccacacatacccccggggactc 410
Query: 421 aagggtgtcccagagtgctccaag---aaaaaaaaaaaaaaaagagatgaccaagccatc 477
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 409 aagggtgtcccagagtgctccaagaaaaaaaaaaaaaaaaaaagagatgaccaagccatc 350
Query: 478 acatatagctctctatggggacaagagacaaagctctttggaaacgggtctcttccccag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 acatatagctctctatggggacaagagacaaagctctttggaaacgggtctcttccccag 290
Query: 538 aacttcagaggcacaaatcctaccctcatagtcaaacccaccaaaggatgtgaaacatgt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aacttcagaggcacaaatcctaccctcatagtcaaacccaccaaaggatgtgaaacatgt 230
Query: 598 ggtttcccctttgtctgctgttgaacaca 626
|||||||||||||||||||||||||||||
Sbjct: 229 ggtttcccctttgtctgctgttgaacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1029
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1019
Effective search space: 627704
Effective search space used: 627704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
