Query= MSMg01no052_d10.b1 MSMg01no052_d10.b1 CHROMAT_FILE:
MSMg01no052_d10.b1 PHD_FILE: MSMg01no052_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:46 2005
(385 letters)
>mm_chr13_20137538_20138322
Length = 785
Score = 706 bits (365), Expect = 0.0
Identities = 380/385 (98%)
Strand = Plus / Plus
Query: 1 agccctaagctcttaacttctacagataaacacacatcgacacattctgctaacaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccctaagctcttaacttctacagataaacacacatcgacacattctgctaacaaacca 260
Query: 61 atgttcacagctagtcctctatttctcctaaacgttataaatcagtcaacacagtattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttcacagctagtcctctatttctcctaaacgttataaatcagtcaacacagtattca 320
Query: 121 aaacatggaactatgccagcagtgtcttcattaggcaagaacatgctttaggcaactaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacatggaactatgccagcagtgtcttcattaggcaagaacatgctttaggcaactaaa 380
Query: 181 gttgatgacggtccatgcgtttgaaagtcccccttcctgagcaacatgtcaccttttgta 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgatgacggcccatgcgtttgaaagtcccccttcctgagcaacatgtcaccttttgta 440
Query: 241 tagaatttttgctgtgtggcgacaaggctcagcctggcctataatgcttccactgagact 300
||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct: 441 tagaacttttgctgtgtggggacaaggctcagcctggcctagaaggcttccactgagact 500
Query: 301 cttcttttttgtaaagtatataagtaccatgtctcacagacatttccaacggttcctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcttttttgtaaagtatataagtaccatgtctcacagacatttccaacggttcctgat 560
Query: 361 acaggaaacaaaccaaaaccctcca 385
|||||||||||||||||||||||||
Sbjct: 561 acaggaaacaaaccaaaaccctcca 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_d10.g1 MSMg01no052_d10.g1 CHROMAT_FILE:
MSMg01no052_d10.g1 PHD_FILE: MSMg01no052_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:46 2005
(296 letters)
>mm_chr13_20245837_20246532
Length = 696
Score = 505 bits (261), Expect = e-147
Identities = 291/307 (94%), Gaps = 12/307 (3%)
Strand = Plus / Minus
Query: 1 cttctgaagggaatttcttcttagaaaagttttgtttctcctttt-aaatgtgttcagta 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 407 cttctgaagggaatttcttcttagaaaagttttgtttctccttttaaaatgtgttcagta 348
Query: 60 atcatagctggtaatctgcaagtttctgagtgcttataggaaatattttaagttgcatat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atcatagctggtaatctgcaagtttctgagtgcttataggaaatattttaagttgcatat 288
Query: 120 tagccttttctaccacttgagtgaattatgtatgtaagacacactccctacgtcccgcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 287 tagccttttctaccacttgagtgaattatgtatgtaagacacactccctacatcccacca 228
Query: 180 tattcaacggaaacacttgcctttccttaaaaaagaaaaaaaggaaaaagaaaaaa---- 235
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 227 tattcaatggaaacacttgc-tttccttaaaaaagaaaaaaaggaaaaagaaaaaagaaa 169
Query: 236 ------aaattaccttctatttagaaaatactagttcaaaggttttttatatggaatttt 289
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 168 aaaagaaaattaccttctatttagaaaatattagttcaaaggttttttatatggaatttt 109
Query: 290 taaaaaa 296
|||||||
Sbjct: 108 taaaaaa 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
