Query= MSMg01no053_e12.b1 MSMg01no053_e12.b1 CHROMAT_FILE:
MSMg01no053_e12.b1 PHD_FILE: MSMg01no053_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:09 2005
(372 letters)
>mm_chr15_14283009_14283780
Length = 772
Score = 652 bits (337), Expect = 0.0
Identities = 364/373 (97%), Gaps = 1/373 (0%)
Strand = Plus / Plus
Query: 1 gtttatgatgtgaaagtc-aaattaatccatagtgccttgtgaaaatggtcacaaccaat 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gtttatgatgtgaaagtccaaattaatccatagtgccttgtgaaaatggtcacaaccaat 259
Query: 60 tttttaatctatattcttttgctcaaatgtcattttctcttctctgtagtttacccctaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 tttttaatctatattcttttgctcaaatgtcattttctcttctctgtagtttactcctaa 319
Query: 120 caagttttagagtttgcaaagaaaacttgctatctaaaatattactatgaatatcatttt 179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 caagttttagagtttgcaaagaaaacttgctatctaaaatattactataaatatcatttt 379
Query: 180 ataaataccacagggaacactaataaaaataaagtacaaatatatgcatatatgtgtgtg 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||
Sbjct: 380 ataaataccacagggaacactaataaaaataaagtaaaaatatatgcatatatatatgtg 439
Query: 240 tgtgtgtgtgtgtgttagatatatgcacactgagaagaatgaaggatttagagtaatcat 299
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 tgtatgtgtgtgtgttagatatatgcacactgagaagaatgaaggatttagagtaaccat 499
Query: 300 gccaaattataaagaagaaaccattcaaagttactctaatcacatgcttgcatatgttat 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 gccaaattataaagaagaaaccattcaaagttactctaatcacatgtttgcatatgttat 559
Query: 360 gtgttagacaatg 372
|||||||||||||
Sbjct: 560 gtgttagacaatg 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_e12.g1 MSMg01no053_e12.g1 CHROMAT_FILE:
MSMg01no053_e12.g1 PHD_FILE: MSMg01no053_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:09 2005
(421 letters)
>mm_chr13_28577679_28578497
Length = 819
Score = 669 bits (346), Expect = 0.0
Identities = 402/424 (94%), Gaps = 8/424 (1%)
Strand = Plus / Minus
Query: 1 atttcaactttcgtatttgatttccagacatttcttatagcttaatatctagtgaaagcc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atttcaacttttgtatttgatttccagacatttcttatagcttaatatctagtgaaagcc 560
Query: 61 tgtagatattcacttaacagtatttttgtttattcatgggacatagctctttagaattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgtagatattcacttaacagtatttttgtttattcatgggacatagctctttagaattct 500
Query: 121 ttgacagctcaaatttcaggtcatattgtggctttttcttgaaaattagtatttttctat 180
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 499 ttgacagctcaaccttcaggtcatattgtggctttttcttgaa----agtatttttctat 444
Query: 181 acctgtgtatactaagtgattttggatgtttttattgaccctatgaatattcattgtatg 240
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 acctttgtatactaagtgattttggatgtttttattgaccccatgaatattcattgtatg 384
Query: 241 gagctggtagggagatttctattatactagtattgcagaatgcccccccccct---tttt 297
|| | | ||||||||||||||||||||||||| || |||||| || ||||| | ||||
Sbjct: 383 gatcagatagggagatttctattatactagta-tggagaatggccacccccttttctttt 325
Query: 298 ttagcagtcaagacacttgctttaggctgcttagtctcagtttgtggctctctaaccgtg 357
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 324 ttagcagtcaagacacttgctttaggttgctcagtctcagtttgtggctctctaaccgtg 265
Query: 358 ctatcctggatgggctctcctgcacatgtgtaaatttggggtttagaatgatatatatgt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctatcctggatgggctctcctgcacatgtgtaaatttggggtttagaatgatatatatgt 205
Query: 418 atgt 421
||||
Sbjct: 204 atgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 819
Length adjustment: 9
Effective length of query: 412
Effective length of database: 810
Effective search space: 333720
Effective search space used: 333720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
