Query= MSMg01no054_i20.b1 MSMg01no054_i20.b1 CHROMAT_FILE:
MSMg01no054_i20.b1 PHD_FILE: MSMg01no054_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:46 2005
(586 letters)
>mm_chr13_80112739_80113724
Length = 986
Score = 1064 bits (550), Expect = 0.0
Identities = 562/566 (99%), Gaps = 2/566 (0%)
Strand = Plus / Minus
Query: 22 atgaataccaaaatggctgagaagcacctgaaaaaatcagtatggtggttcctca-gaaa 80
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 732 atgaataccaaaatggctgagaagcacctgaaaaaatcagtatggtggttcct-aggaaa 674
Query: 81 atttgatataatactaccagacgacccagagtagaataatcttcactcaacctttggatt 140
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atttgatataatactaccagaggacccagagtagaataatcttcactcaacctttggatt 614
Query: 141 atctggtcagttttaaaacataagagtctctagtgttttccttactcagagctaaaggga 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atctggtcagttttaaaacataagagtctctagtgttttccttactcagagctaaaggga 554
Query: 201 gctgggtaagatggcagatgctggcatgcggcaaggacaaatgggcggtaatcttggtgg 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gctgggtaagatggcagatgctggcatgcggcaaggacaaatgggcggtaatcttggtgg 494
Query: 261 tactagccagcagttgctagtcccagagcctagcaggagcaagcgtgcactttcaaaaac 320
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tactagccagcagctgctagtcccagagcctagcaggagcaagcgtgcactttcaaaaac 434
Query: 321 agaattatgtccaacatggtaggtgagaatccattaattatttaggattctcaaattgat 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agaattatgtccaacatggtaggtgagaatccattaattatttaggattctcaaattgat 374
Query: 381 tcagacacagtgatgcaagtctggaaggatgggagagttagtttcttagcaagcagagca 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcagacacagtgatgcaagtctggaaggatgggagagttagtttcttagcaagcagagca 314
Query: 441 gagttgaaagaacttagtggggaaactctcactcttatcccgagtcagcgtccacccaaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gagttgaaagaacttagtggggaaactctcactcttatcccgagtcagcgtccacccaaa 254
Query: 501 gaatcatgagagaccgtcttgatgcaaacacacgaggtagtttaatgatggagctcccga 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gaatcatgagagaccgtcttgatgcaaacacacgaggtagtttaatgatggagctcccga 194
Query: 561 cagacagacatgtatctcacacagga 586
||||||||||||||||||||||||||
Sbjct: 193 cagacagacatgtatctcacacagga 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_i20.g1 MSMg01no054_i20.g1 CHROMAT_FILE:
MSMg01no054_i20.g1 PHD_FILE: MSMg01no054_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:46 2005
(243 letters)
>mm_chr13_79931255_79931897
Length = 643
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 1 ttgtaaacacagtgggagaatggagacagacaggttcctaaatatcattctacatcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtaaacacagtgggagaatggagacagacaggttcctaaatatcattctacatcttgc 260
Query: 61 ttaggttagtctatgagatccacattcaaagagagagtttttcttaaaaaattaagcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaggttagtctatgagatccacattcaaagagagagtttttcttaaaaaattaagcata 320
Query: 121 gaaagtaattgaggaaagacaagatatcaattttaggattccacatgtgtgcatatacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagtaattgaggaaagacaagatatcaattttaggattccacatgtgtgcatatacat 380
Query: 181 atttaagtgccaatgtttatatatatatatatatatatatatatatatatat 232
|||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 atttaagtgccaatgtttatatatatatatatatatatatatgtatatatat 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
