Query= MSMg01no055_e21.b1 MSMg01no055_e21.b1 CHROMAT_FILE:
MSMg01no055_e21.b1 PHD_FILE: MSMg01no055_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:41 2005
(310 letters)
>mm_chr13_15587432_15588141
Length = 710
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%)
Strand = Plus / Plus
Query: 24 cttctaaagattgaaagctttcatgggttctggagtctgccctttttttgtccgtgaatc 83
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 224 cttctaaagattgaaagctttcatgggttctggagtctgccctttttttgtgtgtgaatc 283
Query: 84 cactgatgagagtcctgaaaagtggtctgcctttactcagaggaagacgtgctcagtgaa 143
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 284 cactgatgagagtcctgaaaagtgttctgcctttactcagaggaagacgtgctcagtgaa 343
Query: 144 ctccaccacgctgtttccaggcagtactagtcagagcattcttcctgtgtggggcgaagt 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctccaccacgctgtttccaggcagtactagtcagagcattcttcctgtgtggggcgaagt 403
Query: 204 acaccttcccagaacttcagtaccatatgtttctctttgtcctgcttcctataaaagcac 263
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 404 acaccttcccagaacttcagtaccatctgtttctctttgtcctgcttcctataaaagcac 463
Query: 264 tttaacatatgattttgattggctgcaggagcagaaagtgggctcta 310
||||||||| || ||||||||| ||||||||||||||||||||||||
Sbjct: 464 tttaacataggagtttgattggttgcaggagcagaaagtgggctcta 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_e21.g1 MSMg01no055_e21.g1 CHROMAT_FILE:
MSMg01no055_e21.g1 PHD_FILE: MSMg01no055_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:41 2005
(216 letters)
>mm_chr13_15707928_15708543
Length = 616
Score = 381 bits (197), Expect = e-110
Identities = 212/217 (97%), Gaps = 2/217 (0%)
Strand = Plus / Minus
Query: 1 aaagtctggatagg-tcacttttatattttacagttaatactgggaaggtttgggtaaag 59
|||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 416 aaagtctggataggat-acttttatattttacagttaatactggggaggtttgggtaaag 358
Query: 60 gggccacatttactatcaatactctcacctttaacaatcacaggtgtgtccacacctgac 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 357 gggccacatttactatcaatactctcagctttaacaatcacaggtgtgtccacgcctgac 298
Query: 120 agaaggggtacagacagctgcgtcatcatggagcaagactagaagaaatttggtgccatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agaaggggtacagacagctgcgtcatcatggagcaagactagaagaaatttggtgccatt 238
Query: 180 atacactaactgtaagcatttatttagagacccaaat 216
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atacactaactgtaagcatttatttagagacccaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
