Query= MSMg01no055_l01.b1 MSMg01no055_l01.b1 CHROMAT_FILE:
MSMg01no055_l01.b1 PHD_FILE: MSMg01no055_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:09 2005
(419 letters)
>mm_chr13_8452611_8453428
Length = 818
Score = 729 bits (377), Expect = 0.0
Identities = 410/421 (97%), Gaps = 4/421 (0%)
Strand = Plus / Minus
Query: 1 ttggaggcagaggcaggtggaactctgagtggaggccagtctggtctacagagtgagttc 60
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 685 ttggaggcagaggcaggtggaactctgagtggaggtcagcctggtctacagagtgagttc 626
Query: 61 cagggcaggcagggctacccagagaaaccttgatt-taaaaaaacaaaataacaataaaa 119
||||||||||| |||||| |||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 625 cagggcaggcaaggctacacagagaaaccttaattaaaaaaaaacaaaataacaacaaaa 566
Query: 120 aagagt-taaactgaaaaaaaataaaagaatttgtaagctaactgagtataagatatgtg 178
|||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagagtct-aactg-aaaaaaataaaagaatttgtaagctaactgagtataagatatgtg 508
Query: 179 aaagtactggtatttcttttctctctttagaaaattatagagggtagatctggtattact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaagtactggtatttcttttctctctttagaaaattatagagggtagatctggtattact 448
Query: 239 ttcaaaccatcattccagaggaaatgttgtttttacaactgtcagagggaattatatgag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttcaaaccatcattccagaggaaatgttgtttttacaactgtcagagggaattatatgag 388
Query: 299 aaaaacaatggcgatttcctaacccatcttaacacttatagggtgacttaaagtgacaat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaaaacaatggcgatttcctaacccatcttaacacttatagggtgacttaaagtgacaat 328
Query: 359 ctgtttgctaacataaaagaataatttaattaatcatatatttatttattcatgaatgtc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgtttgctaacataaaagaataatttaattaatcatatatttatttattcatgaatgtc 268
Query: 419 t 419
|
Sbjct: 267 t 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_l01.g1 MSMg01no055_l01.g1 CHROMAT_FILE:
MSMg01no055_l01.g1 PHD_FILE: MSMg01no055_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:09 2005
(159 letters)
>mm_chr13_8389890_8390448
Length = 559
Score = 298 bits (154), Expect = 1e-85
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 aaaagagcatggccagataatatttacagtagcaatactaaatgaggcaaagaagaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagagcatggccagataatatttacagtagcaatactaaatgaggcaaagaagaaagg 260
Query: 61 agacaggcaacaacttaaactcttgttttatcctttagaaacacacccatttaaattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacaggcaacaacttaaactcttgttttatcctttagaaacacacccatttaaattttc 320
Query: 121 catttcacagtgcaacagtagaacgtggtggcac 154
||||||||||||||||||||||||||||||||||
Sbjct: 321 catttcacagtgcaacagtagaacgtggtggcac 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
