MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-056B22
Chromosome	13 (Build37)
Map Location	56,679,416 - 56,679,733
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Tmed9, B4galt7, Caml, Ddx46, B230219D22Rik, 2310047H23Rik, Pcbd2, Catsper3, Pitx1, H2afy, BC027057, Neurog1, Cxcl14, LOC100040926, AU042651, Il9, Fbxl21, Lect2
Downstream gene	Tgfbi, Smad5, EG627415, Trpc7, LOC100040995, Spock1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tmed9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67511 MGI:1914761
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B4galt7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218271 MGI:2384987
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Caml (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12328 MGI:104728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212880 MGI:1920895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230219D22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78521 MGI:1925771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69672 MGI:1916922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcbd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72562 MGI:1919812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Catsper3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76856 MGI:1924106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pitx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18740 MGI:107374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	H2afy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26914 MGI:1349392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC027057 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212937 MGI:2385852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neurog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18014 MGI:107754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57266 MGI:1888514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	AU042651 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328258 MGI:2145373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16198 MGI:96563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxl21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213311 MGI:2442921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lect2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16841 MGI:1278342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfbi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21810 MGI:99959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17129 MGI:1328787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627415 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Trpc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Spock1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20745 MGI:105371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmed9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802106 GeneID:67511 MGI:1914761
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 protein transport domain containing 9 transcript_id : NM_026211.2

name	B4galt7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122526 GeneID:218271 MGI:2384987
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) transcript_id : NM_146045.1

name	Caml (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78126154 GeneID:12328 MGI:104728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium modulating ligand transcript_id : NM_007596.2

name	Ddx46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78126141 GeneID:212880 MGI:1920895
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 transcript_id : NM_145975.2

name	B230219D22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341429 GeneID:78521 MGI:1925771
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230219D22 gene transcript_id : NM_181278.2

name	2310047H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52693934 GeneID:69672 MGI:1916922
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047H23 gene transcript_id : NM_175150.3

name	Pcbd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52421793 GeneID:72562 MGI:1919812
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 transcript_id : NM_028281.1

name	Catsper3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802013 GeneID:76856 MGI:1924106
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cation channel, sperm associated 3 transcript_id : NM_029772.2

name	Pitx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130224 GeneID:18740 MGI:107374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 1 transcript_id : NM_011097.2

name	H2afy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41152516 GeneID:26914 MGI:1349392
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : H2A histone family, member Y transcript_id : NM_012015.1

name	BC027057 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381297 GeneID:212937 MGI:2385852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC027057 transcript_id : NM_145976.3

name	Neurog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271508 GeneID:18014 MGI:107754
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenin 1 transcript_id : NM_010896.2

name	Cxcl14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392097 GeneID:57266 MGI:1888514
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 14 transcript_id : NM_019568.2

name	LOC100040926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264244 GeneID:100040926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040926 transcript_id : XM_001475501.1

name	AU042651 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384287 GeneID:328258 MGI:2145373
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU042651 transcript_id : NM_177809.3

name	Il9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680436 GeneID:16198 MGI:96563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 9 transcript_id : NM_008373.1

name	Fbxl21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803463 GeneID:213311 MGI:2442921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 21 transcript_id : NM_178674.4

name	Lect2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754529 GeneID:16841 MGI:1278342
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukocyte cell-derived chemotaxin 2 transcript_id : NM_010702.1

name	Tgfbi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803530 GeneID:21810 MGI:99959
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor, beta induced transcript_id : NM_009369.2

name	Smad5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734445 GeneID:17129 MGI:1328787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 5 (Drosophila) transcript_id : NM_008541.2

name	EG627415 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395150 GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG627415 transcript_id : XM_892071.2

name	Trpc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129964 GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 7 transcript_id : NM_012035.2

name	Spock1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50053937 GeneID:20745 MGI:105371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 transcript_id : NM_009262.2

name	Tmed9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385718 GeneID:67511 MGI:1914761
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : transmembrane emp24 protein transport domain containing 9 protein_id : NP_080487.1

name	B4galt7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122527 CCDS:CCDS26550.1 GeneID:218271 MGI:2384987
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008378 - galactosyltransferase activity [Evidence ISS]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0046525 - xylosylprotein 4-beta-galactosyltransferase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0043206 - fibril organization and biogenesis [Evidence ISS]; GO:0006024 - glycosaminoglycan biosynthesis [Evidence ISS]; GO:0048147 - negative regulation of fibroblast proliferation [Evidence ISS]; GO:0006029 - proteoglycan metabolism [Evidence ISS] codon_start : 1 note : xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) product : xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 protein_id : NP_666157.1

name	Caml (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78126155 CCDS:CCDS26551.1 GeneID:12328 MGI:104728
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence IDA]; GO:0001881 - receptor recycling [Evidence IMP] codon_start : 1 product : calcium modulating ligand protein_id : NP_031622.2

name	Ddx46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78126142 GeneID:212880 MGI:1920895
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : DEAD box polypeptide 46 protein_id : NP_666087.2

name	B230219D22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044487 CCDS:CCDS26552.1 GeneID:78521 MGI:1925771
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 product : hypothetical protein LOC78521 protein_id : NP_851795.1

name	2310047H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52693935 CCDS:CCDS26553.1 GeneID:69672 MGI:1916922
definition	GO_function : GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 product : disulfide isomerase protein_id : NP_780359.2

name	Pcbd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52421794 CCDS:CCDS26554.1 GeneID:72562 MGI:1919812
definition	GO_component : GO:0005634 - nucleus [Evidence IPI] GO_function : GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051291 - protein heterooligomerization [Evidence IPI]; GO:0051289 - protein homotetramerization [Evidence IPI]; GO:0006729 - tetrahydrobiopterin biosynthesis [Evidence IEA] codon_start : 1 note : dimerization cofactor of hepatocyte nuclear factor 1 (HNF1) from muscle product : pterin-4 alpha-carbinolamine dehydratase 2 protein_id : NP_082557.1

name	Catsper3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30350218 CCDS:CCDS26555.1 GeneID:76856 MGI:1924106
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 product : cation channel, sperm associated 3 protein_id : NP_084048.1

name	Pitx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755070 CCDS:CCDS26556.1 GeneID:18740 MGI:107374
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : paired-like homeodomain transcription factor 1 protein_id : NP_035227.1

name	H2afy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41152517 CCDS:CCDS26557.1 GeneID:26914 MGI:1349392
definition	GO_component : GO:0001740 - Barr body [Evidence ISS]; GO:0005813 - centrosome [Evidence TAS]; GO:0000793 - condensed chromosome [Evidence IDA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007549 - dosage compensation [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 note : MACROH2A1.2 product : H2A histone family, member Y protein_id : NP_036145.1

name	BC027057 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122419 CCDS:CCDS26558.1 GeneID:212937 MGI:2385852
definition	codon_start : 1 product : hypothetical protein LOC212937 protein_id : NP_666088.1

name	Neurog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754826 CCDS:CCDS26559.1 GeneID:18014 MGI:107754
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0031536 - positive regulation of exit from mitosis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : neurogenic differentiation 3 product : neurogenin 1 protein_id : NP_035026.1

name	Cxcl14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392098 GeneID:57266 MGI:1888514
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : musculus CXC chemokine MIP-2gamma; small inducible cytokine subfamily B (Cys-X-Cys), member 14 product : kidney-expressed chemokine CXC protein_id : NP_062514.2

name	LOC100040926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264245 GeneID:100040926
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475551.1

name	AU042651 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244360 CCDS:CCDS26561.1 GeneID:328258 MGI:2145373
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC328258 protein_id : NP_808477.1

name	Il9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680437 CCDS:CCDS26562.1 GeneID:16198 MGI:96563
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA]; GO:0005140 - interleukin-9 receptor binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0045407 - positive regulation of interleukin-5 biosynthesis [Evidence IMP] codon_start : 1 product : interleukin 9 protein_id : NP_032399.1

name	Fbxl21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776547 CCDS:CCDS26563.1 GeneID:213311 MGI:2442921
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 21 protein_id : NP_848789.2

name	Lect2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754530 CCDS:CCDS26564.1 GeneID:16841 MGI:1278342
definition	GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : chondromodulin-II product : leukocyte cell-derived chemotaxin 2 protein_id : NP_034832.1

name	Tgfbi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678321 GeneID:21810 MGI:99959
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 function : cell adhesion inhibitor note : transforming growth factor, beta induced, 68 kDa product : transforming growth factor, beta induced protein_id : NP_033395.1

name	Smad5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678774 CCDS:CCDS26565.1 GeneID:17129 MGI:1328787
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030509 - BMP signaling pathway [Evidence TAS] [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] [Evidence IDA] codon_start : 1 note : Smad 5 product : MAD homolog 5 protein_id : NP_032567.1

name	EG627415 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950827 GeneID:627415 MGI:3648142
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897164.1

name	Trpc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755889 CCDS:CCDS26566.1 GeneID:26946 MGI:1349470
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transient receptor protein 8; mouse transient receptor potential protein homologue TRP7 product : transient receptor potential cation channel, subfamily C, member 7 protein_id : NP_036165.1

name	Spock1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50053938 GeneID:20745 MGI:105371
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : sparc/osteonectin, cwcv and kazal-like domains proteoglycan product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 protein_id : NP_033288.2

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 2 pseudo : _no_value

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 1 pseudo : _no_value

clone name	MSMg01-120E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356G22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-056B22.T7 (MSMg01no056_b22.b1)	MSMg01-056B22.TJ (MSMg01no056_b22.g1)
ACC	AG283608	AG283609
length	1,004	751
length of high quality (start - end)	---	318 (74 - 391)
definition	CHROMAT_FILE: MSMg01no056_b22.b1 PHD_FILE: MSMg01no056_b22.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:57:42 2005	CHROMAT_FILE: MSMg01no056_b22.g1 PHD_FILE: MSMg01no056_b22.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 16:57:42 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GTTGTTTCGTTCTCGGCTTCTATTAAATTTGCGNNGCCGTCTTAAATACG NAACTTNNCACNNTAATAGTGTTCAGCCAGAAAATACACGNCGNGNAAAT TTCCNCCTTCCTTTTTGTATTTACTCGTAAGAGNAACGGGGAGGNCCTTT TTGGAAAAANTTGGGGGGTTTTTTTATACACCATTTTTGGTTTTGTTTTG GAAAAATTCCCAGCCGAGAAGGGGCCCCGGGCTAGGGGGCCTGGTGGCCA TCCGGGAAACCCCCCTGTGGTAAAATGGGGGGAACCCTTCTTCCTCTCCT CCCCCCGTGAAAGTGGGCTCCCCCCAGAAGAATTTTTCTCCTGTAAACAA AATTTATCACTTCCCCCCACCCAAGGGGGTTTTTTTTGGTGCCCCCCCCC CCATGTGGTGGGGCACTATATGAAAACTTTATTTTTTGTTTTCCCCGTAA AAACACATATATAAGGGTTTTTGTTTTTTTCTTTTTTGTAAAAACATATT TTTTTAAAAAAAAATGGCCGGCCGCGAGGGGAGATGAAAAAAAAAACAAA CATATTTTTTATNAAGGAGGGGCCCTCTTCCCCTTCTCCGCTTATATTTT ATATAAAAATAGAATAAATTGATGGTTTGTTTTTCTCTCCCTTACAAGAC ATATACATTTTCTATATCTTTACCTTCTCCTTTTTTATTTTATTTGTGTG TGGTGGGGCGCCTCCCCCCATTATTAGATATGTGGTAATATAAACTACAC CCTCCCCCCCTTTATTCTGATATTTATCTTTTTTGTTCTCTTTTATTAAA TAACACAAACTATTTTTTGTTTGGCTGCGCCGGGTGTTTTCTTTTTCTTA TCTCTTCCTTTCTATTCTTTTATCATTAATTAAATATATACAATACGCTT TCTCTTCTTTCTTTTTTTTTCCAGCTACATTGCTATACTTATATATTTTG TCTTCTTCTCTCTCCTCTCTTCTCCTCATCTACCCTGTCATTATAATATA TATA	NCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXCTGATGGCTGGGAGTCCAGGTCAAGGC AGCTACTGGGCAGCTGTTGGGGCAGGGCTACTTCTGTTTCCACTATGGTG CATGGATGCTGTGTCCTCTGAAGGGAAGGAATGCTGCCCTCACTTGGCTG AAGACAGAAGGGCAAACTCCCTTTTCAAGCCCTGGTGTGTGTGTGCTCAT ATGTGGAGTAGTGTGTGTGGAGGGCAGAGATACCAGGAGATCTGATTCAG TATTGATGAGAGTGACAAGAGGCACCTGCCTGTTCCCTCTCCTAGGTGAC ATCTCTACTGAGATCCTAATGAATGAGGAGTGGGGGTTGGGGATGCCTTC CCCTTTTCCCACTTGTCCTTTCACTTAAAATAATATAATAGCTTTATCGG TTCGTTAACTATATATTTCATTATACTTTAATCATTGATAGTTTTTTATA TTATAAATTTTTATAAATTAAATTAATTTCTCATAATTTTGTTATATATA TCAAATAATATATTTAAATACACTATTACCATTAATTCTAATATATAACG TTTATATTGATTAGATATCATTATCATTATACTATTCAACCTATTATTAA TTATTATATCTTTCTTATCCTAATACCACATAAAACCCCCCTCCCCCCAA TATTTTATATCACCACACCCACTCCTCCAATATTAACACTTTCTTATCTC T
quality values	Open. Hide. 7 7 6 6 7 10 10 9 11 19 9 8 8 8 8 8 7 7 10 8 12 8 8 8 8 8 10 12 15 22 21 18 3 0 0 3 9 9 7 6 6 9 8 9 9 17 19 23 23 3 0 3 8 8 8 3 0 0 3 10 3 0 0 3 6 7 13 10 8 8 8 6 8 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 3 0 3 3 0 3 0 3 11 8 15 22 15 15 3 0 3 13 11 15 12 12 12 12 12 11 11 8 8 8 12 8 8 8 6 6 6 8 6 6 6 6 9 3 0 3 14 16 16 8 8 6 6 6 3 0 3 7 7 9 9 9 7 8 8 8 8 8 11 3 0 3 11 11 15 20 17 13 10 10 9 10 12 12 15 10 8 8 8 8 8 8 10 9 9 9 11 10 10 9 9 11 11 10 11 17 14 8 11 8 8 8 8 16 19 12 8 8 8 8 8 8 9 12 12 6 6 6 6 6 6 9 6 7 6 6 6 8 8 8 8 8 10 10 8 9 9 9 9 9 8 8 8 8 8 8 8 8 12 8 8 8 8 10 8 14 11 10 10 9 9 9 11 11 11 9 6 6 6 6 6 6 7 7 11 9 10 10 10 14 12 9 9 9 9 9 12 11 9 9 8 8 8 8 6 6 6 6 6 8 11 12 13 20 15 7 7 7 7 10 10 6 6 6 6 6 7 9 13 11 11 11 22 21 12 8 8 8 8 8 8 11 11 11 11 8 8 6 6 6 8 8 8 6 6 10 11 7 6 7 12 8 11 13 13 7 8 6 8 8 8 8 8 12 12 15 14 18 11 10 6 6 6 8 8 6 9 9 9 8 8 8 8 9 19 13 13 8 8 8 9 8 9 12 16 16 24 20 15 9 10 10 10 8 10 8 8 8 8 8 8 8 8 10 8 6 6 8 8 9 10 8 8 9 15 11 8 8 8 8 9 9 9 13 13 8 8 8 8 8 8 10 11 11 16 16 13 13 13 16 12 16 13 8 8 7 8 7 7 8 7 6 8 8 15 13 19 10 10 10 8 9 8 8 8 8 10 10 8 8 8 6 6 10 10 17 10 8 8 8 8 8 9 12 6 6 6 6 6 6 25 22 23 17 17 14 14 14 15 23 28 21 10 9 10 10 9 10 8 6 6 6 8 11 10 8 8 8 8 8 8 9 8 8 8 8 8 8 8 10 9 9 9 9 7 7 6 9 6 8 6 6 8 6 6 8 9 17 19 12 9 9 3 0 3 10 8 8 8 8 12 13 8 8 8 9 12 11 10 10 11 11 11 11 12 11 11 10 10 10 10 8 8 8 8 8 8 15 11 10 8 8 8 8 9 20 20 14 11 10 6 6 6 6 7 7 12 12 8 8 6 6 6 6 8 8 6 8 6 6 7 12 8 10 9 8 8 8 8 8 8 10 10 12 11 12 12 8 8 8 8 8 8 8 8 8 9 10 11 11 13 12 12 8 8 8 8 10 12 9 8 8 6 6 8 8 8 8 6 6 10 8 10 13 15 13 7 9 7 10 10 8 8 8 8 8 8 8 8 9 10 8 10 8 8 8 8 8 10 6 6 6 8 9 12 13 20 13 10 8 6 6 7 6 8 6 10 10 11 13 8 8 8 8 8 8 8 8 10 11 8 8 8 8 8 8 6 6 6 8 7 7 6 6 6 7 7 12 16 15 10 10 8 8 8 8 8 8 9 10 10 11 11 11 16 8 8 8 8 8 8 11 11 10 9 11 9 12 11 16 12 12 23 17 12 10 8 6 6 10 6 8 8 8 8 10 8 8 8 8 6 6 8 8 8 12 13 13 7 6 8 10 12 12 11 11 11 9 7 6 6 6 6 6 6 8 8 9 15 17 6 6 6 8 9 13 8 8 8 8 8 8 8 9 10 10 9 9 9 9 13 11 12 15 10 8 8 11 8 8 8 8 6 7 8 6 8 8 8 8 8 8 8 8 12 13 11 8 7 7 8 10 8 8 8 8 8 6 8 8 9 8 11 9 9 9 9 9 10 13 12 20 18 14 12 12 13 19 10 10 6 6 8 8 8 8 9 10 10 10 9 9 9 9 11 12 15 9 9 8 8 8 8 6 6 8 10 8 8 9 9 9 8 8 8 8 8 10 15 12 11 8 10 7 9 12 11 12 10 11 10 8 19 13 11 10 10 7 6 8 10 6 6 6 8 8 9 9 11 11 11 12 15 17 11 10 8 8 8 8 8 8 8 8 8	Open. Hide. 0 3 7 7 10 6 6 8 8 8 8 6 6 8 22 18 18 18 22 37 26 22 10 10 10 22 22 41 27 23 8 6 6 6 7 6 8 8 13 18 14 19 22 23 33 33 33 36 36 36 36 33 33 33 33 33 25 17 13 11 11 11 19 18 22 16 15 10 12 23 29 36 35 47 36 36 36 36 37 37 50 47 47 48 47 57 57 57 48 48 48 43 48 48 68 68 53 53 54 54 54 54 54 68 68 57 57 57 48 47 47 48 57 57 57 57 57 44 32 18 14 14 14 32 32 54 54 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 50 47 47 57 57 57 57 57 50 50 51 51 51 68 68 68 68 68 68 57 57 57 57 57 57 52 59 59 59 59 59 59 50 46 46 46 46 46 57 57 57 57 57 57 57 57 68 57 57 57 57 57 57 57 57 52 52 52 57 57 57 59 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 57 57 57 57 52 52 52 57 52 52 57 57 57 52 52 43 43 35 35 35 44 43 35 35 57 57 36 36 43 28 29 43 36 41 41 50 42 50 52 52 52 43 43 57 50 37 35 43 43 57 57 57 57 52 52 43 43 43 44 44 43 43 27 30 28 18 14 14 14 28 32 47 59 59 59 59 59 57 57 68 68 57 57 57 57 57 57 57 54 46 46 43 43 46 46 47 54 57 57 57 57 57 48 32 32 15 15 15 26 26 37 44 39 39 39 35 37 35 31 31 23 24 28 33 30 30 30 30 30 30 30 37 30 22 17 17 17 16 22 9 9 9 8 11 10 16 15 11 8 8 8 8 8 8 6 7 8 8 9 9 10 10 10 10 10 8 8 8 8 8 7 7 8 8 10 10 8 10 10 10 6 6 8 8 8 6 6 8 8 11 15 10 10 10 10 10 11 11 11 11 11 11 8 9 8 8 8 8 8 8 9 9 8 10 8 10 9 9 7 7 7 8 8 8 10 8 8 8 8 13 11 10 10 13 10 10 10 16 19 17 15 10 8 8 6 6 6 8 8 8 8 6 6 8 10 8 8 8 8 10 9 10 10 10 8 8 7 6 8 8 8 8 9 10 9 9 13 15 21 13 15 15 15 13 9 9 9 9 9 10 10 8 10 8 8 8 8 14 10 10 10 10 10 15 13 12 8 8 11 12 10 9 12 12 10 10 8 8 8 8 12 7 6 8 6 8 9 11 11 13 11 13 13 9 10 10 8 8 8 12 8 8 6 6 6 6 10 10 10 10 8 8 8 8 9 11 11 11 11 11 11 11 9 9 10 8 8 8 6 6 8 8 10 12 14 10 15 9 10 10 10 10 10 11 11 11 12 15 12 12 10 10 8 8 7 6 10 10 10 10 8 8 8 8 8 8 9 11 11 8 10 7 7 8 8 8 8 8 8 6 6 8 8 12 10 10 9 8 8 6 6 10 10 10 9 9 11 11 11 11 11 11 11 11 10 10 10 17 10 11 17 10 8 9 8 8 8 10 9 9 9 12 6 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 11 11 11 11 11 11 12 11 13 11 11 11 11 9 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no056_b22.g1 MSMg01no056_b22.g1 CHROMAT_FILE:
MSMg01no056_b22.g1 PHD_FILE: MSMg01no056_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:42 2005
         (318 letters)



>mm_chr13_56679057_56679774
          Length = 718

 Score =  592 bits (306), Expect = e-173
 Identities = 315/318 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgatggctgggagtccaggtcaaggcagctactgggcagctgttggggcagggctactt 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 677 ctgatggctgggagtccaggtcaaggcagctacagggcagctgttggggcagggctactt 618

                                                                       
Query: 61  ctgtttccactatggtgcatggatgctgtgtcctctgaagggaaggaatgctgccctcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ctgtttccactatggtgcatggatgctgtgtcctctgaagggaaggaatgctgccctcac 558

                                                                       
Query: 121 ttggctgaagacagaagggcaaactcccttttcaagccctggtgtgtgtgtgctcatatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttggctgaagacagaagggcaaactcccttttcaagccctggtgtgtgtgtgctcatatg 498

                                                                       
Query: 181 tggagtagtgtgtgtggagggcagagataccaggagatctgattcagtattgatgagagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tggagtagtgtgtgtggagggcagagataccaggagatctgattcagtattgatgagagt 438

                                                                       
Query: 241 gacaagaggcacctgcctgttccctctcctaggtgacatctctactgagatcctaatgaa 300
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gacaaaacgcacctgcctgttccctctcctaggtgacatctctactgagatcctaatgaa 378

                             
Query: 301 tgaggagtgggggttggg 318
           ||||||||||||||||||
Sbjct: 377 tgaggagtgggggttggg 360


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space:   219081
Effective search space used:   219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information