XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAAGCCGCGGAATTCC
CTTCTTTTGCCCGGCTTTAATTCCATGAAATGGCTGTTGGTTTCCTACAA
TACATAAGTGCCATTACTACATCTTTGAAGATATATTATGGTGTTGGTCA
ATGTTGTGACTCACAGGAGTTACAACTGGGTATGACAATTGGTTCATCTT
CTCTCTTGTCAGCTTTCATAGCTCCTTGCTGTACCATGACTTTTCAAATA
ATTGGCCTATAAAATTACTGAGGCTGTTGACTATATATACCAATATTTCT
CAATATACCTAAATTCGGACACACAGTAAGTTTGCAATCTTTATTTCTGA
GTAGTGTTTTAAGATTAAATTGTTCATAAAAATAAATTGGTTTTACAAAC
AAAACATTTTTTTGTTTAAAAGCTCAGTAAACTGCTAAGATTCTAGAAAG
CATATGTTCTTTAAAAATAAACTAGACCATTTCTCTTCACACCATTTTGG
TATAGCTACATAAGTTAATAATCAAATGCAATCCTATGAAGGCATTTTCT
GTATATGTCATGAGGACACTTCGTACTCAACTAGGAGATATAATGCAGGG
AAAATGCTGCTTTGAAACTCTGGTTTCTGCATGAACATTTTCATTTTACA
AGAATGCTGACAATATTCACAGCAGCATTGAGTTGTGATTTATATTGGGT
TTGCA

ATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGTGGAATCGCAAATAGCTGAGAAA
CTGCTAAAGAAATGTTCAACATCCTTAGTCATCAGGGAAATGCAAGTCGA
AAAAAACCCTGAGATTCCACCTCACCCCATTCAGAATGGCTAAGATAAAA
ACTCAGGTTACAACAGAAGCTGCCAAGGATGTGGAGAAAGAGGAACACTC
TTGGTGGAACCAACTTGTGGAAATTAATCTGACAGTTCCTCAGAAAACTG
GAAATAGCTCTACCTGAAGTCCCAGCTATACCACTCCTAGGCATATACCC
AAAAGATTCTCCAATATATAACAAGGACAGGGGCTCCAACTTGTTCATAG
TGGCCTTATTTATAACACCCAGAAGCTAGAAACAACTGAGACATCCTGCC
ATGGAAGAATGGATACAGAACGTGTATTACATTTACTCAATGCAATACTA
CTCAGCTATTAAAAATGAGGACATCACAAACTTGGTTGGTAAATGGACAG
AACTAGAAAATATCATCCTTAGTGGAGATAACCCAGACCCAAAAGGACAT
ACGTGGGATATGCTCACTGATAAGTAGATATTAGCTAAAAAGCTCACTGT
ACCCATGATACAAGACCATATGGAGCTTAACAAGAAGGAAGGTCAAAATT
TG

Query= MSMg01no057_g23.b1 MSMg01no057_g23.b1 CHROMAT_FILE:
MSMg01no057_g23.b1 PHD_FILE: MSMg01no057_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:23 2005
         (657 letters)



>mm_chr13_89156115_89157173
          Length = 1059

 Score = 1110 bits (574), Expect = 0.0
 Identities = 639/668 (95%), Gaps = 18/668 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcccttcttttgccc----ggctttaattcca-tgaaatggctgttggtttcctac 58
           ||||||||||||||||       ||||||||||||| |||||||||||||||||| ||||
Sbjct: 196 gaattcccttcttttg---aatgggctttaattccaatgaaatggctgttggtttactac 252

                                                                       
Query: 59  aatacataagtgccattacta-catctttgaagatatattatggtgttggtcaatgttgt 117
           ||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct: 253 aatacataagtgccattac-agcatctttgaagatatagtatggtgttggtcaatgttgt 311

                                                                       
Query: 118 gactcacaggagttacaactgggtatgacaattggttcatcttctctcttgtcagctttc 177
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 312 gactcacaggagttacaactgggcatgacaattggttcatcttctctcttgtcagctttc 371

                                                                       
Query: 178 atagctccttgctgtaccatgactt------ttcaaataattggcctataaaattactga 231
           |||||||||||||||||||||||||      |||||||||||||||||||||||||||||
Sbjct: 372 atagctccttgctgtaccatgacttctattattcaaataattggcctataaaattactga 431

                                                                       
Query: 232 ggctgttgactatatataccaatatttctcaatatacctaaattcggacacacagtaagt 291
           |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 432 ggctgttggctatatataccaatatttctcaatatacctaaattctgacacacagtaagt 491

                                                                       
Query: 292 ttgcaatctttatttctgagtagtgttttaagattaaattgttcataaaaataaattggt 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttgcaatctttatttctgagtagtgttttaagattaaattgttcataaaaataaattggt 551

                                                                       
Query: 352 tttacaaacaaaacattttttt--gtttaaaagctcagtaaactgctaagattctagaaa 409
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||
Sbjct: 552 tttacaaacaaaacatttttttttgtttaaaagctcagtaaactgctaagattatagaaa 611

                                                                       
Query: 410 gcatatgttctttaaaaataaactagaccatttctcttcacaccattttggtatagctac 469
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 612 gcatatgttcttaaaaaataaactagaccatttctcttcacaccattttggtatagctag 671

                                                                       
Query: 470 ataagttaataatcaaatgcaatcctatgaaggcattttctgtatatgtcatgaggacac 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ataagttaataatcaaatgcaatcctatgaaggcattttctgtatatgtcatgaggacac 731

                                                                       
Query: 530 ttcgtactcaactaggagatataatgcagggaaaatgctgctttgaaactctggtttctg 589
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 732 ttcatactcaactaggagatataatgcagggaaaatgctgctttgaaactctggttcctg 791

                                                                       
Query: 590 catgaacattttcattttacaagaatgctgacaatattcacagcagcattgagttgtgat 649
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 792 catgaacattttcattttacaagaatgctgacaatattcacaacagcattgagttgtgat 851

                   
Query: 650 ttatattg 657
           ||||||||
Sbjct: 852 ttatattg 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1059
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1049
Effective search space:   678703
Effective search space used:   678703
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)