Query= MSMg01no057_h22.b1 MSMg01no057_h22.b1 CHROMAT_FILE:
MSMg01no057_h22.b1 PHD_FILE: MSMg01no057_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:27 2005
(205 letters)
>mm_chr13_9325906_9326510
Length = 605
Score = 350 bits (181), Expect = e-101
Identities = 199/205 (97%)
Strand = Plus / Plus
Query: 1 agtcacttcattttaatctgctgtcctagatctgattttactatggtcagctgcaagtta 60
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agtcacttcattttaatctgccgtcctagatctgattttactatggtcagttgcaagtta 260
Query: 61 tagtgaagatagtgttgtctactttatgatcctcacctgcctttacttttgcttattttt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 tagtgaagacagtgttgtctactttatgatcctcacctgcctttacttttgtttattttt 320
Query: 121 tgagatatggtctccatatagctcacactagtctcaagttcacagcctatgcttgtctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tgagatatggtctccatatagctcacactagtctcaagttcacagcctaggcttgtctgg 380
Query: 181 atcttgcagcaattttgcctcagtg 205
|||||||||||||||||||||||||
Sbjct: 381 atcttgcagcaattttgcctcagtg 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no057_h22.g1 MSMg01no057_h22.g1 CHROMAT_FILE:
MSMg01no057_h22.g1 PHD_FILE: MSMg01no057_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:27 2005
(347 letters)
>mm_chr13_9430970_9431716
Length = 747
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Minus
Query: 1 attcttttaaatgagaggcagttccatggaaaatgtggctcacaaagttcagcccatgag 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 345 attcttttaaatgagaggcagttccatggaaaatgtggctcagaaagttcagcccatgag 286
Query: 61 caaaatacacgcatacttttatgaggtaactgtcagacctcagtatctggttctcactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caaaatacacgcatacttttatgaggtaactgtcagacctcagtatctggttctcactcc 226
Query: 121 aagtcttaaagcatgctcctgtggtgagatttagaaaactggtactttcactgcttcacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 225 aagtcttaaagcatgctcctgtggtgagatttagaaaactggtactttcactgctttacc 166
Query: 181 aagcatattccaagtaaaattaaccttttcttccttaaattatgtgattcacagtatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aagcatattccaagtaaaattaaccttttcttccttaaattatgtgattcacagtatgaa 106
Query: 241 aatgaatttgatggactgatactactgtctaaaccttgctcaagacaccttttgttccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aatgaatttgatggactgatactactgtctaaaccttgctcaagacaccttttgttccaa 46
Query: 301 atttcctgaaagagccctgtatcccagccaggaaactcccagagg 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atttcctgaaagagccctgtatcccagccaggaaactcccagagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
