XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAATAGGCGGAATTC
CAAACTGAGGATTCGTGAATGGATGAGAAGAATCTGAATAAATATTCAAC
ATCCTTAATCATCAGGGAAATGCAAATCAAAAGAACCCTGAGATTCCACC
TCACACCAATCAGAATGGCTAAGATCAAAAACTCAAGTGACAGCAGATGC
TGGGGAGGACGTGGAGAAAGAGGAACACTCCATTATTGGTGGGATTGCAA
GATGGTACAATCATTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATTGG
ACATAGTACTACAGGAAGATCCAGCAATACCTCTCCTGGGAATATACCTA
GAAAATGTTCCAACTTGTAATAAGGACATATGCTCCACTATGTTCATAGC
AGTCTTATTTATAATAGCCAGAAGCTGGAAAGAATCCAGATGTCCCTCAA
CAGAAGAATGGATACAGAAAATGTGGTACATTTACACAATTTAATACTAC
TCAGCTATTAAAAACAATGAATTTATGAAATTCTTAGGCAAATGGATGGA
TCTGGAAGATATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACACAC
ATCAAATGCACTCACTGATAAGTGAATATTATCCCAGAAACTTAGAATAC
CGAANATACAATTTGCAGAACACATGAAACTCAAGAAGAAGGAAGACCAA
AGTGTGGATCCTACATTCCTTCTTAGAATGGGGAAC

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCCGAAACAAGACTGCTGTAAAAAGTGAAAACTAGACTGGG
AGGCGCAGGGAGACATAAGCACTAATAAAAATTATAGAAAGTTTTTTTTT
TTTTAGTAGACATTCCTAGTGGACTATTACAGTGTGACTTAAACACTATT
CTCACTTAAATTCACTTTTTCTTTTTACTATGATGATTAATGGACTATTT
TCTACAAACACATTCTTCACGTGGACTATGCCTTTGGCCGGTCATGTTTC
TTCCCTTTTCACTTATGCTTCTTGTGTGTGTGCCGTGTGTTCTACATCAG
AAGGAACCCCTCTTGCTCAGATTATGTGGGAATGAGAGGAGGTCACCCTC
TGGAACACCGCTGCCACCAGAGGAGAGAGACTAAGCATTCTTTTTCAAAT
CAGGGATACTGTGAGCTGTCTAGTGTGCTTTAAGCTGTTAGGAAAAGTCA
TTTATCCTAGAGAAACACAGACTTGGGAGCCTGCTTTTAAGTTCTCTCTG
CCTAACTTACCAGAGTCATCTTCATTTTCATTGTGAGAATGTGTCATGTC
TGCTTTTTAAGTGGCTCTGGGGCTAAAGCCTGGAGCTTGAAATGTTTCCT
TCCATGGAAGATGTGAAATAGCATGCAAAAAGTACTAGGTGTAGCTGTGA
GTGTATTATGTATTCAATAAGTTTTTATT

Query= MSMg01no059_o18.g1 MSMg01no059_o18.g1 CHROMAT_FILE:
MSMg01no059_o18.g1 PHD_FILE: MSMg01no059_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:32 2005
         (547 letters)



>mm_chr13_84966526_84967469
          Length = 944

 Score = 1002 bits (518), Expect = 0.0
 Identities = 538/546 (98%), Gaps = 3/546 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agactgctgtaaaaagtgaaaactagactgggaggcgcagggagacataagcactaataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 agactgctgtaaaaagtgaaaactagactgggaggcgcagggagacataagcactaataa 684

                                                                       
Query: 61  aaattatagaaagtttttttttttttagtagacattcctagtggactattacagtgtgac 120
           |||||||||||||   ||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 683 aaattatagaaag---ttttttttttagtagatgttcctagtggactattacagtgtgac 627

                                                                       
Query: 121 ttaaacactattctcacttaaattcactttttctttttactatgatgattaatggactat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttaaacactattctcacttaaattcactttttctttttactatgatgattaatggactat 567

                                                                       
Query: 181 tttctacaaacacattcttcacgtggactatgcctttggccggtcatgtttcttcccttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tttctacaaacacattcttcacgtggactatgcctttggccggtcatgtttcttcccttt 507

                                                                       
Query: 241 tcacttatgcttcttgtgtgtgtgccgtgtgttctacatcagaaggaacccctcttgctc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 506 tcacttatgcttcttgtgtgtgtgccgtgtgttctacatcagaaggaacccctcttgcac 447

                                                                       
Query: 301 agattatgtgggaatgagaggaggtcaccctctggaacaccgctgccaccagaggagaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agattatgtgggaatgagaggaggtcaccctctggaacaccgctgccaccagaggagaga 387

                                                                       
Query: 361 gactaagcattctttttcaaatcagggatactgtgagctgtctagtgtgctttaagctgt 420
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 386 gactaagcattctttttcaaatcagggatactgcgagctgtctagtgtgctttaagctgt 327

                                                                       
Query: 421 taggaaaagtcatttatcctagagaaacacagacttgggagcctgcttttaagttctctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 taggaaaagtcatttatcctagagaaacacagacttgggagcctgcttttaagttctctc 267

                                                                       
Query: 481 tgcctaacttaccagagtcatcttcattttcattgtgagaatgtgtcatgtctgcttttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 266 tgcctaacttaccagagtcatcttcattttcattgtgagaatgtgtcatgtatgcttttt 207

                 
Query: 541 aagtgg 546
           ||||||
Sbjct: 206 aagtgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 944
Length adjustment: 10
Effective length of query: 537
Effective length of database: 934
Effective search space:   501558
Effective search space used:   501558
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)