Query= MSMg01no060_p23.b1 MSMg01no060_p23.b1 CHROMAT_FILE:
MSMg01no060_p23.b1 PHD_FILE: MSMg01no060_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:51 2005
(648 letters)
>mm_chr13_27013548_27014593
Length = 1046
Score = 1137 bits (588), Expect = 0.0
Identities = 630/644 (97%), Gaps = 2/644 (0%)
Strand = Plus / Minus
Query: 5 gaattcttccttttctctttgccttcagaattaagagaaaaacttaggaaaaagtaaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 846 gaattcttccttttctctttgccttcagaattaagagaaaaacttaggaaaaagtgaaac 787
Query: 65 attttaggttttgccttcttaaaattaaagtgctttaacaactgactgaataattcagat 124
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 786 attataggttttgccttcttaaaattaaagtgctttaacaactgactgaacaattcagat 727
Query: 125 taagccaacattccttgtgaagcttggtaaaagactctcctgtcttcagggccagcatgt 184
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 726 taaaccaacattcc-tgtgaagcttggtaaaagactcccctgtcttc-gggccagcatgt 669
Query: 185 cacttcactcaacatcactcatatccagctggccaacacaaggatgtcacacttgatgtt 244
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 668 cacttcactcaacaccactcatatccagctggccaacaggaggatgtcacacttgatgtt 609
Query: 245 gataaccaccagccctgggccagccagcatcattagccacaaaactataacttcaaggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gataaccaccagccctgggccagccagcatcattagccacaaaactataacttcaaggga 549
Query: 305 attggataaagtatgactccttcttatcttctccactcattttagagtcaacccacttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 attggataaagtatgactccttcttatcttctccactcattttagagtcaacccacttct 489
Query: 365 ggaatagtccaaggcacttccgaaaaactctcgtcagaagcttttgtttaagacttgagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggaatagtccaaggcacttccgaaaaactctcgtcagaagcttttgtttaagacttgagg 429
Query: 425 gaaattcagtagatatccctatcaatcccttacaatagtttactttcttactctatcgta 484
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 428 gaaattcagtagatatccctatcaatcccttacaatagtttactttcttgctctatcgta 369
Query: 485 acttcacatcctatagaaaactctagctagctaagacacagatagaaatggcaaggatag 544
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 368 acttcacatcctatagaaaactctagctagctaagacacagatagaaatggcgaggatag 309
Query: 545 tttcattgccaaccaagattggagttcatgggaaaccttttagatagacattggaaactg 604
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tttcattgtcaaccaagattggagttcatgggaaaccttttagatagacattggaaactg 249
Query: 605 gctggcattttaaaattcctttctgcttatggatttcatttctg 648
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gctggcattttaaaattcctttctgcttatggatttcatttctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1046
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1036
Effective search space: 660968
Effective search space used: 660968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_p23.g1 MSMg01no060_p23.g1 CHROMAT_FILE:
MSMg01no060_p23.g1 PHD_FILE: MSMg01no060_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:51 2005
(536 letters)
>mm_chr13_26883062_26883997
Length = 936
Score = 1036 bits (536), Expect = 0.0
Identities = 536/536 (100%)
Strand = Plus / Plus
Query: 1 tcactcacacttgtaatcttgacaccgaggaatctgaggctggaggattactgcaagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactcacacttgtaatcttgacaccgaggaatctgaggctggaggattactgcaagctt 260
Query: 61 gaggacactcttactttgttacataaagtaccaggccaaattgggtatagagttgactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggacactcttactttgttacataaagtaccaggccaaattgggtatagagttgactct 320
Query: 121 tctagcacaggattttaattatgaggacctgcatctctttctaatactgactatgggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctagcacaggattttaattatgaggacctgcatctctttctaatactgactatgggcat 380
Query: 181 ttccagtgagaattcagaggctattgtgggatcacaaccaagcctaacctggctgacccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccagtgagaattcagaggctattgtgggatcacaaccaagcctaacctggctgacccg 440
Query: 241 catagctgtgtggatcttttgaaccttgcaaaactgtggcaaatgccagatacagaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catagctgtgtggatcttttgaaccttgcaaaactgtggcaaatgccagatacagaaaga 500
Query: 301 tattctgagaaaatgggaaaacagttcattctggctctaactttgattggttctttgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattctgagaaaatgggaaaacagttcattctggctctaactttgattggttctttgttg 560
Query: 361 gtgaattgtcttagtgttgagttatttcaaatatatatctgttttggattatttgggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaattgtcttagtgttgagttatttcaaatatatatctgttttggattatttgggttc 620
Query: 421 cacctctaaatggggtctctatgtggtggtagaatctatctgtactcactttataatgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacctctaaatggggtctctatgtggtggtagaatctatctgtactcactttataatgag 680
Query: 481 gaattaaagtgattggaatgaggtttaaataagaaatgtctctcacagactcagat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaattaaagtgattggaatgaggtttaaataagaaatgtctctcacagactcagat 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
