Query= MSMg01no061_e04.b1 MSMg01no061_e04.b1 CHROMAT_FILE:
MSMg01no061_e04.b1 PHD_FILE: MSMg01no061_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:11 2005
(578 letters)
>mm_chr13_8803597_8804574
Length = 978
Score = 1079 bits (558), Expect = 0.0
Identities = 570/574 (99%)
Strand = Plus / Minus
Query: 5 gaattcaaagcactttcatttatagctgtggttataaacagtttttagaagtttcaaatg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gaattcaaagcactttaatttatagctgtggttataaacagtttttagaagtttcaaatg 719
Query: 65 atttatccattgaatgtgacttgatctttatacaaaggcccttctacctgaagacaaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atttatccattgaatgtgacttgatctttatacaaaggcccttctacctgaagacaaaat 659
Query: 125 attatttattttctacatctttggttttcatatttctaaatgggttcacttccttggtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 attatttattttctacatctttggttttcatatttctaaatgggttcacttccttggtgg 599
Query: 185 tgtttggagagccaagaatgcaaataaatgagcactacctcaaaataaatattgggaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tgtttggagagccaagaatgcaaataaatgagcactacctcaaaataaatattgggaaac 539
Query: 245 ctttggagtctcactgctgcatggataaagcacttgatttaaagctggattattgaattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctttggagtctcactgctgcatggataaagcacttgatttaaagctggattattgaattc 479
Query: 305 aaggcagaaggcaagaaagacaaccgcaccctatgtagcttgcaggtgaaaggctctcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaggcagaaggcaagaaagacaaccgcaccctatgtagcttgcaggtgaaaggctctcta 419
Query: 365 ggtagcctgccaaggtgatagccgtggcagacagttatataggcaaccagaagcgcttgt 424
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggtagcctgggaaggtgatagccgtggcagacagttatataggcaaccagaagcgcttgt 359
Query: 425 cttgaacagcttggatacctctcagtgccagtctttctactgcacgagtgagccttttgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cttgaacagcttggatacctctcagtgccagtctttctactgcacgagtgagccttttgt 299
Query: 485 tctctccttctagacatcactgttcatctgatgtttgtaagtttgtgtttcatacagagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tctctccttctagacatcactgttcatctgatgtttgtaagtttgtgtttcatacagagt 239
Query: 545 tacagttttgacaaagagacatctcagttactgc 578
||||||||||| ||||||||||||||||||||||
Sbjct: 238 tacagttttgataaagagacatctcagttactgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_e04.g1 MSMg01no061_e04.g1 CHROMAT_FILE:
MSMg01no061_e04.g1 PHD_FILE: MSMg01no061_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:11 2005
(567 letters)
>mm_chr13_8695616_8696582
Length = 967
Score = 1036 bits (536), Expect = 0.0
Identities = 557/564 (98%)
Strand = Plus / Plus
Query: 2 tgttgttatgccacatatgattgagagcccaacctcttaaagtgtcagcaggagcccctg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgttgttatgccacatatgattgagagcccaacctcttaaagtgtcagcaggagcccctg 261
Query: 62 cagtggctcccttttctccccccagagataggtttggctgcaactgtcactccttttttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagtggctcccttttctccccccagagataggtttggctgcaactgtcactccttttttt 321
Query: 122 ctaatatcaatatttccgcagattctacaacaacaacaaaaatccttacttcctaccaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctaatatcaatatttccgcagattctacaacaacaacaaaaatccttacttcctaccaga 381
Query: 182 acagcagccactggggcaaaactcaaggatggccatgctgttcctagtcccggctctcag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acagcagccactggggcaaaactcaaggatggccatgctgttcctagtcccggctctcag 441
Query: 242 aatgatgtctatcaaaacagaacctgacttttgcatggctgtacaatgtagttgagaaca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aatgatgtctatcaaaacagaacctgacttttgcatggctgtacaatgtagttgagaaca 501
Query: 302 attaaatgagaggaaatatttatttcttactgtggtttgcgagatttcagtccataagac 361
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attaaatgggaggaaatatttatttcttactgtggtttgcgagatttcagtccataagac 561
Query: 362 agagaatcttgcatcttagtgggctgggaagtaagaaaaggggactatccatatttgtct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agagaatcttgcatcttagtgggctgggaagtaagaaaaggggactatccatatttgtct 621
Query: 422 tagttatagttttactgctgggaacagacaccatgaccaaggcaactcttactaggacaa 481
||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagttatggttttactactgtgaacagacaccatgaccaaggcaactcttactaggacaa 681
Query: 482 catttaattaggggtagctcacaggttcagataccctgtccactatcagaagcatggcgg 541
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 682 catttaattaggggtagctcacaggttcagatattctgtccactatcagaagcatggcag 741
Query: 542 tgcccaggcaggcacagtacagga 565
||||||||||||||||||||||||
Sbjct: 742 tgcccaggcaggcacagtacagga 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
