Query= MSMg01no063_a08.b1 MSMg01no063_a08.b1 CHROMAT_FILE:
MSMg01no063_a08.b1 PHD_FILE: MSMg01no063_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:13 2005
(340 letters)
>mm_chr13_70741169_70741908
Length = 740
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 5 gaattctgt-aatatcccttgacaccatgtacccagagttatctgccagagcccggaccc 63
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaattctgtaaaaat-ccttgacaccatgtacccagagttatctgccagagcccggaccc 482
Query: 64 tcagcctcctcaaagggaacatgcagctctcccgaggctccactgtggatggaaaggtgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagcctcctcaaagggaacatgcagctctcccgaggctccactgtggatggaaaggtgt 422
Query: 124 taccagggcgggtcagtgctctcctaggactcaaagctataacctcaacatcaactgcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taccagggcgggtcagtgctctcctaggactcaaagctataacctcaacatcaactgcat 362
Query: 184 ttgtcctaacggggggcagctctggtgctgacggtagccaaggtaagtcacaagactcgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgtcctaacggggggcagctctggtgctgacggtagccaaggtaagtcacaagactcgg 302
Query: 244 gtgtccagcaggatgcaggtgggaaaagaacactagcagtatccatgctgaggagtgcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgtccagcaggatgcaggtgggaaaagaacactagcagtatccatgctgaggagtgcta 242
Query: 304 aaagactgcgcctggacaacaagtccccagaaccaga 340
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagactgcgcctggacaacaagtccccagaaccaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_a08.g1 MSMg01no063_a08.g1 CHROMAT_FILE:
MSMg01no063_a08.g1 PHD_FILE: MSMg01no063_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:13 2005
(284 letters)
>mm_chr13_70639876_70640559
Length = 684
Score = 509 bits (263), Expect = e-148
Identities = 275/279 (98%)
Strand = Plus / Plus
Query: 5 atataggggagaacccacacagggaacaggtttggtcctgcacttctcagggatgtgcat 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 atataggggagaacccacacagggaacaggtttggtcctgcacttctgagggatgtgcat 264
Query: 65 tgccttagggaaaagcctcttccaagcagctctgaacacacagagacctcggccttcatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgccttagggaaaagcctcttccaagcagctctgaacacacagagacctcggccttcatc 324
Query: 125 agtttcccagctcagcacacacctatgtctccaccagagttcaagcacaacctcaatgcc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 agtttcccagctcagcacacacctatgtctccaccagagttcaagcacaacctcaatgtc 384
Query: 185 tatagacagtgattaggtaatgtgctggaggaacaagggtcaggttacagaaagtcaagg 244
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 tatagacagtgattaggtaatgtgctggaggaacaaggctcaggttacagaaagtcaagg 444
Query: 245 cagcatagacctgtgaagggcaaagatgtttctggttga 283
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 cagcatagacctgtgaagggtaaagatgtttctggttga 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
