Query= MSMg01no064_d03.b1 MSMg01no064_d03.b1 CHROMAT_FILE:
MSMg01no064_d03.b1 PHD_FILE: MSMg01no064_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:56 2005
(424 letters)
>mm_chr13_55332265_55333087
Length = 823
Score = 746 bits (386), Expect = 0.0
Identities = 402/412 (97%), Gaps = 9/412 (2%)
Strand = Plus / Minus
Query: 17 gaattctattacagccagggctaaagagacagagaaaccctgtctgaaattccctgctcc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaattctattacagccagggctaaagagacagagaaaccctgtctgaaattccctgctcc 613
Query: 77 caaaagaaaaatttgccaatc----atcccccattatttaagtcctaaatgtacttgttt 132
||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 612 caaaagaaaaatttgccaatcattgat-----attatttaagtcctaaatgtacttgttt 558
Query: 133 atttgcaatcattaataaatattattcaattcttatttacttgttatttccaatttatca 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atttgcaatcattaataaatattattcaattcttatttacttgttatttccaatttatca 498
Query: 193 agcacaatgatctttcctgcatttccataaggcatactttatacttattacaagataact 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agcacaatgatctttcctgcatttccataaggcatactttatacttattacaagataact 438
Query: 253 aacacttttggcctccaagcacaagtgccccgatatacacacatacacatacacaacaca 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aacacttttggcctccaagcacaagtgccccgatatacacacatacacatacacaacaca 378
Query: 313 cacagtaacagtatcagtttagtccatggattcaaagctggatagaacaactgaagctca 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cacagtaacagtatcagtttagtccatggattcaaagctggatagaacaactgaagctca 318
Query: 373 tattattaatgaccacatttatcatttgataacaataaaacctcagatacta 424
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aattattaatgaccacatttatcatttgataacaataaaacctcagatacta 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_d03.g1 MSMg01no064_d03.g1 CHROMAT_FILE:
MSMg01no064_d03.g1 PHD_FILE: MSMg01no064_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:57 2005
(281 letters)
>mm_chr13_55186719_55187397
Length = 679
Score = 354 bits (183), Expect = e-102
Identities = 192/195 (98%), Gaps = 2/195 (1%)
Strand = Plus / Plus
Query: 1 tcttctcctaatgaaaacactgtatgaattcaattaaaaaatgaaaacttacgtgcaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttctcctaatgaaaacactgtatgaattcaattaaaaaatgaaaacttacgtgcaact 260
Query: 61 tttcttttagccaaacactttgatctgttcgactgttttgtcttcgttttctgcaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcttttagccaaacactttgatctgttcgactgttttgtcttcgttttctgcaatcca 320
Query: 121 ttctcctcttttgtttcctgttataaataaanaaaataagaatcagagtaggtgacatta 180
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 321 ttctcctcttttgtttcctgttataaataaa-aaaataaga-tcagagtaggtgacatta 378
Query: 181 aaattaataattttt 195
||| |||||||||||
Sbjct: 379 aaagtaataattttt 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 679
Length adjustment: 9
Effective length of query: 272
Effective length of database: 670
Effective search space: 182240
Effective search space used: 182240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
