Query= MSMg01no066_p14.b1 MSMg01no066_p14.b1 CHROMAT_FILE:
MSMg01no066_p14.b1 PHD_FILE: MSMg01no066_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:57 2005
(549 letters)
>mm_chr13_61349185_61350135
Length = 951
Score = 1046 bits (541), Expect = 0.0
Identities = 548/551 (99%), Gaps = 2/551 (0%)
Strand = Plus / Plus
Query: 1 acattacatcacgttctgcagtaactcatgaactctatccatgcagcagaggctggtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acattacatcacgttctgcagtaactcatgaactctatccatgcagcagaggctggtcat 260
Query: 61 ggtaaacagaaagtgcctccacttcacaggctgtctccattccaacccttccttcttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaaacagaaagtgcctccacttcacaggctgtctccattccaacccttccttcttacc 320
Query: 121 atcaggcagtttacactctggggtagacggcatatgaagcaattccacagtggttgttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaggcagtttacactctggggtagacggcatatgaagcaattccacagtggttgttcc 380
Query: 181 tgcctctggcaagcttcatgtagccattcatgccccattgctcaccatgactgaaagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctctggcaagcttcatgtagccattcatgccccattgctcaccatgactgaaagaaa 440
Query: 241 ccatgtatcccatttagtagaaagaacacaggacagtgcactcagtacaa--actccacg 298
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 ccatgtatcccatttagtagaaagaacacaggacagtgcactcagtacaataactccacg 500
Query: 299 tgtaaccactgatccagaagcctacttaactccatgatcagaaaatgcaaaacatccaac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaaccactgatccagaagcctacttaactccatgatcagaaaatgcaaaacatccaac 560
Query: 359 tctgagaaaccaaagttatctcagaaaggactgtgcaaatcacagcagcgaaaactcagg 418
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 tctgagaaaccaaagttatctcagaaaggactgtgcaaatcacagcagtgaaaactcagg 620
Query: 419 atatttttccacccacagaaccaacaatatctcagcttttagaaaaatcagtgtcacaaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatttttccacccacagaaccaacaatatctcagcttttagaaaaatcagtgtcacaaa 680
Query: 479 catattactactcaaggaaaccagtgcctaaatctgaacaacacacatactataagttga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catattactactcaaggaaaccagtgcctaaatctgaacaacacacatactataagttga 740
Query: 539 ttacccagcca 549
|||||||||||
Sbjct: 741 ttacccagcca 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 951
Length adjustment: 10
Effective length of query: 539
Effective length of database: 941
Effective search space: 507199
Effective search space used: 507199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_p14.g1 MSMg01no066_p14.g1 CHROMAT_FILE:
MSMg01no066_p14.g1 PHD_FILE: MSMg01no066_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:57 2005
(481 letters)
>mm_chr13_61453995_61454876
Length = 882
Score = 901 bits (466), Expect = 0.0
Identities = 478/482 (99%), Gaps = 1/482 (0%)
Strand = Plus / Minus
Query: 1 ggcaggatttttttttcggttgaagaa-tccaagggggccctaatctgaagctctagctt 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 682 ggcaggatttttttttcggttgaagaagtccaagggggccctaatctgaagctctagctt 623
Query: 60 tagaagccttatcctagcattaagtggaactgggaatcatactccagaagttacatttac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagaagccttatcctagcattaagtggaactgggaatcatactccagaagttacatttac 563
Query: 120 atgatctggctgatccctgtctttggctgtatcaactaacatataatgtatagccaagga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atgatctggctgatccctgtctttggctgtatcaactaacatataatgtatagccaagga 503
Query: 180 gtttagattttatcacttatttccatgagacccaatatcatacttgtgccactgattttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtttagattttatcacttatttccatgagacccaatatcatacttgtgccactgattttc 443
Query: 240 tgtttctcaattaattgttattcctggacaacctattggttgaaggacatcccaattttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgtttctcaattaattgttattcctggacaacctattggttgaaggacatcccaattttc 383
Query: 300 catgctgtgacttttactgtcttttatgagataattcttggtactctggtagttggccat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 catgctgtgacttttactgtcttttatgagataattcttggtactctggtagttggccat 323
Query: 360 ctggcttttctgatgctttctgttaagttggcctatagttcagttctcaaatgcatattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 ctggcttttctgatgctttctgttaagttggcctatagttcagttctcaaatgcagattt 263
Query: 420 gttgtaacaatctattgcactgtttcttttcttgcaaatggaaaacctgatttctttcag 479
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 262 gttgtaacaatctattgtactgtttcttttcttgtaaatggaaaacctgatttctttcag 203
Query: 480 cc 481
||
Sbjct: 202 cc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space: 410712
Effective search space used: 410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
