Query= MSMg01no067_k10.b1 MSMg01no067_k10.b1 CHROMAT_FILE:
MSMg01no067_k10.b1 PHD_FILE: MSMg01no067_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:49 2005
(306 letters)
>mm_chr13_5270329_5271035
Length = 707
Score = 547 bits (283), Expect = e-160
Identities = 298/303 (98%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 5 gaattcacgtctctatgtaagccatctcttagagag-atacattggagctgaccactgca 63
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 453 gaattcacgtctctatgtaagccatctcttagagagcagacattggagctgaccactgca 394
Query: 64 gactactgtttgagcatcataggttcatgctgagcataccatcctgtgcagcactcaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 393 gactactgtttgagcatcataggttcatgctgagcataccatcctgtgcagcattcaagg 334
Query: 124 atagaaatgcatagctgcttctgacaatagaatagataaaagctatgggctagctatact 183
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 333 atagaaatgcatagttgcttctgacaatagaatagataaaagctatggactagctatact 274
Query: 184 gagaggctaaaaatgaacaggaatcagaaaaatcaataaatctgaggattgctacgctgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagaggctaaaaatgaacaggaatcagaaaaatcaataaatctgaggattgctacgctgc 214
Query: 244 aaccatctatttatttgagaaataataattgtgcatatttacagggtatactgtgatttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aaccatctatttatttgagaaataataattgtgcatatttacagggtatactgtgatttt 154
Query: 304 ttt 306
|||
Sbjct: 153 ttt 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 707
Length adjustment: 9
Effective length of query: 297
Effective length of database: 698
Effective search space: 207306
Effective search space used: 207306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_k10.g1 MSMg01no067_k10.g1 CHROMAT_FILE:
MSMg01no067_k10.g1 PHD_FILE: MSMg01no067_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:49 2005
(231 letters)
>mm_chr13_5101058_5101690
Length = 633
Score = 416 bits (215), Expect = e-121
Identities = 228/233 (97%), Gaps = 2/233 (0%)
Strand = Plus / Plus
Query: 1 tccatgcaaattcctgcttggggaactgacttgcttttggctggccattcattggttctt 60
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 201 tccatgcaaattcctgcttggggtactgacttgcttttggctgggcattcattggttctt 260
Query: 61 tgaagagccttttgtttgatgagacacttcccatttattgttgaaaattcttccattcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaagagccttttgtttgatgagacacttcccatttattgttgaaaattcttccattcct 320
Query: 121 tgatttattcaaaaataataccctctagttcattaagctatata--gaagagctttgagc 178
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 321 tgatttattcaaaaataataccctctagttcattaagcgatatattgaagagctttgagc 380
Query: 179 agtgaattagccttgagatagccttgataactgacttaaaagcagtttaatag 231
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgaattagccttgagatagccttgataactgacttaaaagcagtttaatag 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 633
Length adjustment: 9
Effective length of query: 222
Effective length of database: 624
Effective search space: 138528
Effective search space used: 138528
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
