XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAATTCTC
ATTATTCCATGTATGGCAGACCACATTACATTCAGATCCAACACTCCCTT
GTGTTTGTGTCTGTTTATCACTCGCTGACTTCTTGCCCACCTGAGTTCTG
GGACCCTGATTTCTCCTCCAGTTTGAGGGACTCCAACAGAACCAGCCCGC
AGCACTTTAAGATATTCTTAAGAAAACTGTGAAAATATTTTGTATGGGGG
TAAAATAGAGATATAAAGCTTCATGGTTCTGGAAAAAGTAGGAAAGAATA
CATTGCTGTAAGGTGACTTTAGAAGATCAGAAATGTTAGGAATGAGACCT
CTCTGTGTAAGGATTGTAACTGGACAGGAATTTGTGACTCTATTTTAAAA
CTTCATGAACACCCAAGATAGTTACAATTAAATCAGTTCAAAATAAAGTG
GTTTACATCTTTTTAAAAAACTTTTTAAGTTTTAAAATGTTTTCATAGGA
TATATTGTGACCATATTCCCTCCCATTCCCAAACTGTGACCAGATATTAA
TCACCTCCTTATTCACCCAATTTCATGTTATTGTTATCTCTCTTTAAATT
ACAAAAAAGATACCAGTAAAACAAAACTCAAGACCAAACTTATTTTTATG
TTATATACGCATTACCATATAGATGGGTAGTTAGATGTGTTGGAGAA

NNCCGATGAAGTGGGAGGCCTGGCGGCCGCCTGTTTCAAAAATTTAGGTG
ACCTATAGAATTCCCGAGAAATTCTTTGTCTAGCTCTGTACCCCATTTTT
AATAGGGTTATATGGTTTTTCTGGAGTCCAACTTATTGAGTTCTTTATAT
ATATTGGATATTAGACCCCATAAGATTTAGGATAGGAAAAGATCTTTTCC
CAATCAGTTGGTTGTCTTTTTGTCTTATTGACAGTGTCCTTTGCCTTACA
GAAGCTTTGAAATTTTATGAGGTCCTGTTTGTAGATTCTTCTTGCTACAG
CATATGCCATTGGTGTTCTGTTTTTGAATTTTTCTCCTTTGGCCATATCT
TCCAGGCTCTTCCCCACCTTCTCCTCTAGAAGTTTCAGTGTCTCTGGTTT
TATGTGGAGTTCCTTGATCCACTTAGACTTGACCTTTGTACAAGGAGATA
AGAATGGATCAATTCGAATTCTTCTACATGCTAACTGCCAGTTGATCCAG
CACCATTTTTTTGAAAATGCTGTCTTATTTCCACTGGATGGTTTTAGCTC
CTTTGTCCAAGATCAAGGGGCATATACGTGTGTAGGTACATTTCAGGGGC
TTCAATTCTATTCCATTTATCTACCTGCCTGTCACTCTGTCACTGTACTA
GTACCATGTGAGTTTTTTTTTTTTTTCAAATTGCTCTGTAATAATGCTTG
TG

Query= MSMg01no073_d03.b1 MSMg01no073_d03.b1 CHROMAT_FILE:
MSMg01no073_d03.b1 PHD_FILE: MSMg01no073_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:11 2005
         (579 letters)



>mm_chr13_88751661_88752639
          Length = 979

 Score = 1013 bits (524), Expect = 0.0
 Identities = 563/578 (97%), Gaps = 5/578 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   ggaattctcatta---ttccatgtatggcagaccacattacattcagatccaacactccc 61
           |||||||||||||   |  |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 943 ggaattctcattacagt--catgtatggcagaccacattacattcagatccaacactcca 886

                                                                       
Query: 62  ttgtgtttgtgtctgtttatcactcgctgacttcttgcccacctgagttctgggaccctg 121
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ttgtgtttgtgtctgtttgtcactcgctgacttcttgcccacctgagttctgggaccctg 826

                                                                       
Query: 122 atttctcctccagtttgagggactccaacagaaccagcccgcagcactttaagatattct 181
           ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 atttctcctccaggttgaaagactccaacagaaccagcccgcagcactttaagatattct 766

                                                                       
Query: 182 taagaaaactgtgaaaatattttgtatgggggtaaaatagagatataaagcttcatggtt 241
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 765 taagaaaactgtgaaaatattttgtatgggggtaaaatagagatataatgcttcatggtt 706

                                                                       
Query: 242 ctggaaaaagtaggaaagaatacattgctgtaaggtgactttagaagatcagaaatgtta 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ctggaaaaagtaggaaagaatacattgctgtaaggtgactttagaagatcagaaatgtta 646

                                                                       
Query: 302 ggaatgagacctctctgtgtaaggattgtaactggacaggaatttgtgactctattttaa 361
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ggaatgagacctctctctgtaaggattgtaactggacaggaatttgtgactctattttaa 586

                                                                       
Query: 362 aacttcatgaacacccaagatagttacaattaaatcagttcaaaataaagtggtttacat 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aacttcatgaacacccaagatagttacaattaaatcagttcaaaataaagtggtttacat 526

                                                                       
Query: 422 ctttttaaaaaactttttaagttttaaaatgttttcataggatatattgtgaccatattc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctttttaaaaaactttttaagttttaaaatgttttcataggatatattgtgaccatattc 466

                                                                       
Query: 482 cctcccattcccaaactgtgaccagatattaatcacctccttattcacccaatttcatgt 541
           |||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 465 cctcccattcccgaactgttaccagatattaatcacctccttactcacccaatttcatgt 406

                                                 
Query: 542 tattgttatctctctttaaattacaaaaaagataccag 579
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tattgttatctctctttaaattacaaaaaagataccag 368


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)