Query= MSMg01no079_h03.b1 MSMg01no079_h03.b1 CHROMAT_FILE:
MSMg01no079_h03.b1 PHD_FILE: MSMg01no079_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:04 2005
(651 letters)
>mm_chr13_85960554_85961605
Length = 1052
Score = 1093 bits (565), Expect = 0.0
Identities = 631/661 (95%), Gaps = 18/661 (2%)
Strand = Plus / Plus
Query: 5 gaattctcaacggaggaataccaaagggctgagaagcacttgaaaaaatgttcatcatcc 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gaattctcaactgaggaataccaaagggctgagaagcacttgaaaaaatgttcatcatcc 253
Query: 65 ctaatcatcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagtcaga 124
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 254 ctaatcatcagggaaatgaaaatcaaaacaaccctgagattccatctcacaccagtcaga 313
Query: 125 atggctaagatcaaaaattcaggtgacagtagatgctggcgtggatgtggagaaagagga 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 314 atggctaagatcaaaaattcaggtgacagcagatgctggcgtggatgtggagaaagagga 373
Query: 185 acactcct-tcattgctggtgggattgcaagcttgtacaaccactctg------------ 231
|||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 374 acactcctat-attgctggtgggattgcaagcttgtacaaccactctggcaatcagtcta 432
Query: 232 gcgattcctcagaaaattggacatagtactactggaagatccagcaatacctctcctggg 291
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcgattcctcagaaaa-tggacatagtactactggaagatccagcaatacctctcctggg 491
Query: 292 catatacccagaacatgttccaactggtaataaagacaagtgctccactatgttcatagc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 catatacccagaacatgttccaactggtaataaagacaagtgctccactatgttcatagc 551
Query: 352 agacttatttataatagtgaatgtagtagttcttaatattgtctctattaaacagaaata 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 agacttatttataatagtgaatgtagtagttcttaatattgtctctattaaacagaaata 611
Query: 412 gaaattttttgataatgctattccctacctaatagaaaaatgccattttaactttaagag 471
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 612 gaaattttctgataatgctattccctacctaatagaaaaatgccattttaactttaaaag 671
Query: 472 aataatgtttatctgatatttattggatttttgaaagacaaaaaaattgtttctgaaatt 531
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 672 aataatgtttatctgatatttattggatttttgaaagacaaaaaa-ttgtttctgaaatt 730
Query: 532 atatcaaattattaaggttactaaatataaagcagcagcagcatgtatttatattcatat 591
||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||
Sbjct: 731 atatcaaattattaaggttactagatataaaacagcagcatcatgtatttatattcatat 790
Query: 592 gaatatattttatttgcatacaaataa--gtcagatcatcatgcttacacttcatatact 649
|||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 791 gaatatattttattcacatacaaataaaagtcagatcattatgcttacacttcatatact 850
Query: 650 t 650
|
Sbjct: 851 t 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_h03.g1 MSMg01no079_h03.g1 CHROMAT_FILE:
MSMg01no079_h03.g1 PHD_FILE: MSMg01no079_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:04 2005
(607 letters)
>mm_chr13_86090164_86091177
Length = 1014
Score = 1129 bits (584), Expect = 0.0
Identities = 604/614 (98%), Gaps = 7/614 (1%)
Strand = Plus / Minus
Query: 1 tatatgactatgcaagttcaggtttaccgtctcttttgc-agacatatggcagctttcat 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 814 tatatgactatgcaagttcaggtttaccgtctcttttgcaagacatatggcagctttcat 755
Query: 60 taagacatgcttagaattcaatttgggcttcaacttcacaaggccattaattcacaattg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 taagacatgcttagaattcaatttgggcttcaacttcacaaggccattaattcacaattg 695
Query: 120 tgtgggttacacgtgctttctgttctggaacacttgttctttgaccctgagatgaacttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgtgggttacacgtgctttctgttctggaacacttgttctttgaccctgagatgaacttt 635
Query: 180 atgtgtatgttatatggtaatatattaataaaacaagaaaatgcatggagagaccctatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 atgtgtatgttatatggtaatatattaataaaacaagaaaatgcatggagagaccctatt 575
Query: 240 aaatatatttgaagggcacagggaagaataaattactgcaaccctcattattaatgaata 299
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 574 aaatatatttgaagggcacaggaaagaataaactactgcaaccctcattattaatgaata 515
Query: 300 aatactttcaataatgcatctgtgttaatatttattctagtacccaacagat------ac 353
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 514 aatactttcaataatgcatctgtgttaatatttattctagtacccaacagatacacacac 455
Query: 354 acacacacacacatgcagtttttaaggaaactcttgactaagtgtaattttcttggaaat 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acacacacacacatgcagtttttaaggaaactcttgactaagtgtaattttcttggaaat 395
Query: 414 aagtgtttctatagaaggacaaagatactttaaaccagagctttcccaacaatgaataaa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aagtgtttctatagaaggacaaagatactttaaaccagagctttcccaacaatgaataaa 335
Query: 474 cttccactatgtcacaccactcacttttcttaccagactgacattcaaagcttcatcttt 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cttccactatgtcacaccactcacttttcttaccagactgacattcaaagcttcatcttt 275
Query: 534 atgcaccattactctcaaatgttcttcacagatatttcaaattttctactatttagagct 593
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 274 atgcaccattactctcaaatgttcttcacagatatttcaaattctctactatttagagct 215
Query: 594 atagacttaccttt 607
||||||||||||||
Sbjct: 214 atagacttaccttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1014
Length adjustment: 10
Effective length of query: 597
Effective length of database: 1004
Effective search space: 599388
Effective search space used: 599388
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
