TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTTAAATGCCACTGTATTATATTCCAGGCATTAGGTTAAGCCCA
CCACACAACAGTATTACAACCTAAGACTCATTTGATTTAAAACTGGCTCT
TGGTTCTAGAGGTAGAAGGCTACAGCAGAATACAAGATCAAGAACAGTTC
GACCTAAACTAAGGCTTACCAAGGTCCAAGTGTTGTAGGTGAGAACAGGG
ACAAATGTAACCAAGGTAGTAATGTGGAATTCAGCAGGACACTACTGAAA
AGGTAGAAAGGGCAAGCAAAGTCTCAGTGTGGAGGAGGAGAAGGACCACA
CCTGGAATCCCAGGACTCAAGAGGGTGGAAGCTGCAGCCTAGCTGACTCT
GTTCCAAAAATCAAAAACCCAAAACATTTGTAAATCTTGTATCTAACAGA
AGAATGCATCTGAAATACATTAAAATCTGTTTTAGTTTAATGAAGAATTC
AATCTAAAAATAGGCAAAGGATCCAAGTAGACTTTCACCCAAAGGTGGCA
GGTAAATGGCCAACAGGCATAGGAAAAGATGCACAATATCATTAGTCATT
ACAGGAATGCAACTTGAATGCAAAACCCGGAGCTCATTAGACATGAAAGT
GAGCGAGTACAACACCACACCGTTNAAAGTGCTGTCTGGGACATCCAGAA
TTCCACCCTCTACTTGGGGCCTAGGGAATAAACA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGTCATTTGTGACAACGTGGATGAATCTG
AAGAACAAATCACATTAGGTAAAATAAGGCAAGCCCAGGAAGACAAGTAT
GATCCAATCTTACTTATCGATGGAATATAAGTGTGAACTGACAAAAGCAG
ACCCTAGATTGGTAGTGGACAGAATCTGGGAGCAAAGTGAAGTGAGGGTC
AAGTGGGGCAGGGTGGATTGTTCAGGTTGAAAGGTGAACACATTCTGAGA
TTTACTGAACAGCAATATGACCATAACAATGTATAGAACATTTAAAAGAG
ATATGGATATATTTCTAATCTCAGAATAAAAGGGGCAAGTGATGCAATAG
ACATTCTAATTGGCTTTACCTAAGAATTACCCAGCTGCCAGGTGGTGGTG
GCGCACTTGGAAGGCAGAGGCNGGCAGATTTCTGAGTTCGAGGCCAGCCT
GGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTGCACAGAGAAACACTA
TCTCGAAAAAAAACAAAAGCTGATATCACAAACACAATAAGAACCACTAT
AGATTTACCCCGCTATGAGCTCTGCAACCTTGTCTACTGTCCCTGGGGAG
ATATGGGCTTGGGCACCTCGAAGGGCACAAAATGTTGTGGGAGTAACCAC
CCAATTTCCGAAGGATTTAAAAACTCATCTCCAGT

Query= MSMg01no081_f07.b1 MSMg01no081_f07.b1 CHROMAT_FILE:
MSMg01no081_f07.b1 PHD_FILE: MSMg01no081_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:30 2005
         (505 letters)



>mm_chr13_49032590_49033494
          Length = 905

 Score =  953 bits (493), Expect = 0.0
 Identities = 499/501 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttaaatgccactgtattatattccaggcattaggttaagcccaccacacaac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttaaatgccactgtattatattccaggcattaggttaagcccaccacacaac 264

                                                                       
Query: 65  agtattacaacctaagactcatttgatttaaaactggctcttggttctagaggtagaagg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtattacaacctaagactcatttgatttaaaactggctcttggttctagaggtagaagg 324

                                                                       
Query: 125 ctacagcagaatacaagatcaagaacagttcgacctaaactaaggcttaccaaggtccaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctacagcagaatacaagatcaagaacagttcgacctaaactaaggcttaccaaggtccaa 384

                                                                       
Query: 185 gtgttgtaggtgagaacagggacaaatgtaaccaaggtagtaatgtggaattcagcagga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgttgtaggtgagaacagggacaaatgtaaccaaggtagtaatgtggaattcagcagga 444

                                                                       
Query: 245 cactactgaaaaggtagaaagggcaagcaaagtctcagtgtggaggaggagaaggaccac 304
           |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 445 cactactgaaaaggtagaaagggcaagcaaagtctcagcgtggaggaggaggaggaccac 504

                                                                       
Query: 305 acctggaatcccaggactcaagagggtggaagctgcagcctagctgactctgttccaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acctggaatcccaggactcaagagggtggaagctgcagcctagctgactctgttccaaaa 564

                                                                       
Query: 365 atcaaaaacccaaaacatttgtaaatcttgtatctaacagaagaatgcatctgaaataca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atcaaaaacccaaaacatttgtaaatcttgtatctaacagaagaatgcatctgaaataca 624

                                                                       
Query: 425 ttaaaatctgttttagtttaatgaagaattcaatctaaaaataggcaaaggatccaagta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttaaaatctgttttagtttaatgaagaattcaatctaaaaataggcaaaggatccaagta 684

                                
Query: 485 gactttcacccaaaggtggca 505
           |||||||||||||||||||||
Sbjct: 685 gactttcacccaaaggtggca 705


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no081_f07.g1 MSMg01no081_f07.g1 CHROMAT_FILE:
MSMg01no081_f07.g1 PHD_FILE: MSMg01no081_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:30 2005
         (401 letters)



>mm_chr13_49106754_49107554
          Length = 801

 Score =  605 bits (313), Expect = e-177
 Identities = 322/325 (99%)
 Strand = Plus / Minus

                                                                       
Query: 73  caagtatgatccaatcttacttatcgatggaatataagtgtgaactgacaaaagcagacc 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caagtatgatccaatcttacttatcgatggaatataagtgtgaactgacaaaagcagacc 742

                                                                       
Query: 133 ctagattggtagtggacagaatctgggagcaaagtgaagtgagggtcaagtggggcaggg 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctagattggtagtggacagaatctgggagcaaagtgaagtgagggtcaagtggggcaggg 682

                                                                       
Query: 193 tggattgttcaggttgaaaggtgaacacattctgagatttactgaacagcaatatgacca 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggattgttcaggttgaaaggtgaacacattctgagatttactgaacagcaatatgacca 622

                                                                       
Query: 253 taacaatgtatagaacatttaaaagagatatggatatatttctaatctcagaataaaagg 312
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 taacaatgtatagaacatttaaaagagatatggatatatttctaatttcagaataaaagg 562

                                                                       
Query: 313 ggcaagtgatgcaatagacattctaattggctttacctaagaattacccagctgccaggt 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcaagtgatgcaatagacattctaattggctttacctaagaattacccagctgccaggt 502

                                    
Query: 373 ggtggtggcgcacttggaaggcaga 397
           ||| ||||||||||||| |||||||
Sbjct: 501 ggtagtggcgcacttgggaggcaga 477


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space:   310464
Effective search space used:   310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)