Query= MSMg01no082_m16.b1 MSMg01no082_m16.b1 CHROMAT_FILE:
MSMg01no082_m16.b1 PHD_FILE: MSMg01no082_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:21 2005
(679 letters)
>mm_chr13_47880980_47882058
Length = 1079
Score = 1181 bits (611), Expect = 0.0
Identities = 647/665 (97%), Gaps = 10/665 (1%)
Strand = Plus / Minus
Query: 5 gaattctgataaggatcaacaaccatgctgaccgtgcacttgacagatattaacttggta 64
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 793 gaattctgataaggattaacaaccatgctgaccgtgcacttgacaggtattaacttggta 734
Query: 65 tcccataattcttcctcagggtcaggatctgattcttattttgagcatttccgtaccaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tcccataattcttcctcagggtcaggatctgattcttattttgagcatttccgtaccaca 674
Query: 125 aattagtaaggtatctcctttcaaag----------cttgtcgctaagagagatgacata 174
|||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 673 aattagtaaggtatctcctttcaaagctgaaatgtccttgtcgctaagtgagatgacata 614
Query: 175 ctctgttggctgctctaaaatgtaaacacctttgaggagagttacttttactatctggac 234
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 613 ctctgttggctgctctaaaatgtaaacacctttgaggagagttacttttactatctgggc 554
Query: 235 acggtgcgtatgtttaacacctctgatagccgttcaggagcagaactgtgctggcagtcc 294
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acggtgcatatgtttaacacctctgatagccgttcaggagcagaactgtgctggcagtcc 494
Query: 295 ctatctcatatactgcgcacatgacaaaattgcacataacgaagctaggtgtggcggtac 354
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 493 ctatttcatatactgcgcacatgacaaatttgcacataacgaagctaggtgtggcggtac 434
Query: 355 atgcctatggccccagcccctgggaaactaaaccagaaagatcttgtcttaaagagaaaa 414
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 433 atgcctatggccccagcccctgggaaactaaaccagaaagatcttgtctcaaagagaaaa 374
Query: 415 aggaggaggcagggctggagatctgctatgtaagcatgaaaactagtttgaatcttcaga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aggaggaggcagggctggagatctgctatgtaagcatgaaaactagtttgaatcttcaga 314
Query: 475 agccacatacaatgctgggcatggtggaacatgcctgtaaacccaaatacatacactgca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agccacatacaatgctgggcatggtggaacatgcctgtaaacccaaatacatacactgca 254
Query: 535 catacaccacacatgtaatataacacacatactaaataagtgagtaaacaaattaatgaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 catacaccacacatgtaatataacacacatactaaataagtgagtaaacaaattaatgaa 194
Query: 595 tgtaagttctaagtaccatgctcagcaggaggagttgcatgaggaggatatatatatata 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgtaagttctaagtaccatgctcagcaggaggagttgcatgaggaggatatatatatata 134
Query: 655 tatat 659
|||||
Sbjct: 133 tatat 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_m16.g1 MSMg01no082_m16.g1 CHROMAT_FILE:
MSMg01no082_m16.g1 PHD_FILE: MSMg01no082_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:21 2005
(566 letters)
>mm_chr13_47749914_47750882
Length = 969
Score = 1077 bits (557), Expect = 0.0
Identities = 565/569 (99%), Gaps = 3/569 (0%)
Strand = Plus / Plus
Query: 1 tctcctttgaaaactaaagtttaccaaagcaatccccttttgaacctgtgggaccacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctttgaaaactaaagtttaccaaagcaatccccttttgaacctgtgggaccacctg 260
Query: 61 tacatttttatttttaaatcatacctgatgaatattgtatagaattagtcattattgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatttttatttttaaatcatacctgatgaatattgtatagaattagtcattattgccc 320
Query: 121 acattttgaatgtgaagatgtagttaatctggttaaaggattattcaactttacttaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acattttgaatgtgaagatgtagttaatctggttaaaggattattcaactttacttaaat 380
Query: 181 attccaatttttctaaattgggattcaagaagttaagctggctgtgtgcttggccctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attccaatttttctaaattgggattcaagaagttaagctggctgtgtgcttggccctctc 440
Query: 241 cctttcctccatgctgccatctttggggaaagcagagcatccgttggaatgttagcaatt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 cctttcctccatgctgccatctttggggaaagcagagcatcctttggaatgttagcaatt 500
Query: 301 gtccctcttgcccaattcattgattggtttttaatgaggcctccaaaggtatgttgatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtccctcttgcccaattcattgattggtttttaatgaggcctccaaaggtatgttgatga 560
Query: 361 ctaataaaaattagctttgttctgatatgaagttgcagaaatatataaaccatgtaggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaataaaaattagctttgttctgatatgaagttgcagaaatatataaaccatgtaggtc 620
Query: 421 taccgtggatgaagtgtgcatctatagagccgcatgcattttcctttcggtaagcagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taccgtggatgaagtgtgcatctatagagccgcatgcattttcctttcggtaagcagcaa 680
Query: 481 gggcacatgtcaaatggtacttaaggctttcgtgatcaatgtttaaagcagtctcct--- 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggcacatgtcaaatggtacttaaggctttcgtgatcaatgtttaaagcagtctccttct 740
Query: 538 gtttgcaatagatacaaataaaatgtaga 566
|||||||||||||||||||||||||||||
Sbjct: 741 gtttgcaatagatacaaataaaatgtaga 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 969
Length adjustment: 10
Effective length of query: 556
Effective length of database: 959
Effective search space: 533204
Effective search space used: 533204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
