GCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCCG
CGGAATTCTCAAAACTCCCAATTCAAATGCCTAAGAATCACTTAGAAAAA
TATTCAGCACCCTTAGTCATCAGTAAAATGCAAGTCAAACAAAACTACTT
TGAGACTTCATTTACATCCATCAGAATTGCTAAGATCAATAAAACAGAAA
AGACCTCATGCTGGCGAAGATGTAGAGTAAGGTGAGCACTCACTCCTTGC
TGGTTAGCACACATAGCTGTATTTATATAGCCACTATGGAAGTCAGGGTG
TCAGTTCATCACAAAGATGGGAATCGATCTACCCCAAGATTCGGTTCTAT
AGTTTTTGAGCATGTACTCAAAGGAGTCTTCATTCTATTACAGAGACTCT
TGCTCAACCATGTTCATTGCTGCTCTCTATTCATAATGGCCAGAAATGGG
AAAAAAAAAAAACAAAACTAGATGTCTTTCAGTGGATGAATGGATAAAGA
AATGTGATACATTTATACAATGAAATAGTACTTGTCATTAAAAGAATGAA
ACCGTGAAATTTGCATGTAAATAGATAGAACTGTAAAAAAAAAAAAAACA
TCCTGAGTGAGGTAACTCAGACCCACGAAGACAAATATGGTGTACATTCA
CTTCTATGTGGATGTCAGTCTTTAAGTCATTGACAAACAAGC

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCTCTGTAGACCAGGATGGCCTCGA
ACTCAGAAATCTGCCTACCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGT
GCACCACCGCTACCCATCTTGGATGTCTTGTTTTGTTTCAGATAAGGTTT
TGTTGCAGAGCTCACACTGACCTGAATCTCTTCATCCCCCTGCCTTAAGA
GCCTGAGATCACAGGTGTTCACCACCATGCCCCTATGAGTTAATGTTTAT
GTTTGTGTTCATACTGCCTTGATAGCTCTGGATGGCTGATCATACGCTGC
GTTCACAACCCAATGGCTTTCAACCAAAAAAGAAGCTAGAAGAAAATGGA
AATTATGTTTTCCACTTATTTATAATTAATGACACTGAATAATTTAATAT
TATTGCTTTGCTGTGTTTGAGCAAGATCACTTTACCTATGACAAAACATA
TTTTAAAAACAAAACAAAACAAAAACTTGTTATTGGTTGAAAAACTTTTC
CAGGGGCTGGGCATGGTGACTGCATGCCTTTAGACTCTGCGCTCAGGAAG
CATACACTCACAGATTTTGTGAGTTCAAGGCCAGCCTGATGTATGTAGCA
ATTTCCAGACCAGACAGAGCTACACAGTAAAAGTCTTAA

Query= MSMg01no082_o14.g1 MSMg01no082_o14.g1 CHROMAT_FILE:
MSMg01no082_o14.g1 PHD_FILE: MSMg01no082_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:30 2005
         (612 letters)



>mm_chr13_29380419_29381430
          Length = 1012

 Score = 1085 bits (561), Expect = 0.0
 Identities = 600/613 (97%), Gaps = 1/613 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctctgtagaccaggatggcctcgaactcagaaatctgcctacctctgcctcccaagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 869 cctctgtagaccaggatggcctcgaactcagaaatctgcctacctctgcctcccaagcgc 810

                                                                       
Query: 61  tgggattaaaggtgtgcaccaccgctacccatcttggatgtcttgttttgtttcagataa 120
           |||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||||
Sbjct: 809 tgggattaaaggcgtgcaccaccactgcccatcttggatgtcttgttttgtttcggataa 750

                                                                       
Query: 121 ggttttgttgcagagctcacactgacctgaatctcttcatccccctgccttaagagcctg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 749 ggttttgttgcagagctcacactgacctgaatctcttcatccccctgcctcaagagcctg 690

                                                                       
Query: 181 agatcacaggtgttcaccaccatgcccctatgagttaatgtttatgtttgtgttcatact 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agatcacaggtgttcaccgccatgcccctatgagttaatgtttatgtttgtgttcatact 630

                                                                       
Query: 241 gccttgatagctctggatggctgatcatacgctgcgttcacaacccaatggctttcaacc 300
           |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| 
Sbjct: 629 gccttgatagctctggatggctgatcgtacgctgcgttcacaacccaacggctttcaact 570

                                                                       
Query: 301 aaaaaagaagctagaagaaaatggaaattatgttttccacttatttataattaatgacac 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 569 aaaaaagaagctagaagaaaatggaaaatatgttttccacttatttataattaatgacac 510

                                                                       
Query: 361 tgaataatttaatattattgctttgctgtgtttgagcaagatcactttacctatgacaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgaataatttaatattattgctttgctgtgtttgagcaagatcactttacctatgacaaa 450

                                                                       
Query: 421 acatattttaaaaacaaaacaaaacaaaaacttgttattggttgaaaaacttttccaggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acatattttaaaaacaaaacaaaacaaaaacttgttattggttgaaaaacttttccaggg 390

                                                                       
Query: 481 gctgggcatggtgactgcatgcctttagactctgcgctcaggaagcatacactcacaga- 539
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 389 gctgtgcatggtgactgcatgcctttagactctgcgctcaggaagcatacactcacagat 330

                                                                       
Query: 540 ttttgtgagttcaaggccagcctgatgtatgtagcaatttccagaccagacagagctaca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttttgtgagttcaaggccagcctgatgtatgtagcaatttccagaccagacagagctaca 270

                        
Query: 600 cagtaaaagtctt 612
           |||||||||||||
Sbjct: 269 cagtaaaagtctt 257


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)