Query= MSMg01no083_p14.b1 MSMg01no083_p14.b1 CHROMAT_FILE:
MSMg01no083_p14.b1 PHD_FILE: MSMg01no083_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:52 2005
(287 letters)
>mm_chr13_27809690_27810376
Length = 687
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttaaaaaaatcaactataaaaacaaaacagctaataagtaataaataataaaa 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaaaaaaattaactataaaaacaaaacagctaataagtaataaataataaaa 263
Query: 64 tggtctgactacctcttttaactggttcttccttagagaaatgttgcttacaatgaagcg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggtctgactacctcttttaactggttcttccttagagaaatgttgcttacaatgaagcg 323
Query: 124 tgttacaagaaaaaacagatttagatctagataatattaagttgttttggttaatattct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttacaagaaaaaacagatttagatctagataatattaagttgttttggttaatattct 383
Query: 184 ctctcaacttgaattatctagaatcactttggagacaccgattgttagattgggattgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctcaacttgaattatctagaatcactttggagacaccgattgttagattgggattgat 443
Query: 244 caacatgatatggaaacaaaagtgagaatatatggactttcaac 287
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 caacatgatatggaaacaaaagaaagaatatatggactttcaac 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no083_p14.g1 MSMg01no083_p14.g1 CHROMAT_FILE:
MSMg01no083_p14.g1 PHD_FILE: MSMg01no083_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:52 2005
(393 letters)
>mm_chr13_27898620_27899412
Length = 793
Score = 719 bits (372), Expect = 0.0
Identities = 384/392 (97%), Gaps = 7/392 (1%)
Strand = Plus / Minus
Query: 2 aaatatcagtaacatgctttaaagttgctagcaaagtagtaacttttattaaagttagtc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aaatatcagtaacatgctttaaagttgctagcaaagtagtaacttttattaaagttagtc 411
Query: 62 tcatattcagctccatttcccactcttcttcattatttcattgttatttaaatggaaatt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcatattcagctccatttcccactcttcttcattatttcattgttatttaaatggaaatt 351
Query: 122 gtgaagacacagaatattttagccattaagtaaaacacagaggatgcattctaagtgtaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtgaagacacagaatattttagccattaagtaaaacacagaggatgcattctaagtgtaa 291
Query: 182 ggttgtacaacaatttccatttaaaattatcttgagatcatttagggcaggaaatcagaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggttgtacaacaatttccatttaaaattatcttgagatcatttagggcaggaaatcagaa 231
Query: 242 gtgagaaatgataaaaaattaggaattaggaattagaggagacatgatatgtagacttgt 301
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 230 gcgagaaatgataaaaaattaggaattag-------aggagacatgatatgtagacttgt 178
Query: 302 tggcacacagtggggatggttacacactgtgtaacatcttataatgatatctgcatgttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tggcacacagtggggatggttacacactgtgtaacatcttataatgatatctgcatgttt 118
Query: 362 ttctttagctgacgttcaggtatgatatgggt 393
||||||||||||||||||||||||||||||||
Sbjct: 117 ttctttagctgacgttcaggtatgatatgggt 86
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
