Query= MSMg01no084_d08.b1 MSMg01no084_d08.b1 CHROMAT_FILE:
MSMg01no084_d08.b1 PHD_FILE: MSMg01no084_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:10 2005
(516 letters)
>mm_chr13_7425758_7426673
Length = 916
Score = 913 bits (472), Expect = 0.0
Identities = 502/512 (98%)
Strand = Plus / Plus
Query: 5 gaattcaatattaagctcccgaggattttaaagagagagtgtgcacatgtatatttgggt 64
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatattaagctcaagagggttttaaagagagagtgtgcacatgtatatttgggt 264
Query: 65 gcacgtatctgtctacacacatgtcctgatttattattctctgtcttattcctttttgtc 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcacgtatctgtatacacacatgtcctgatttattattctctgtcttattcctttttgtc 324
Query: 125 aaggtctatgactgaacatgtagctaggcaggcagggactctctgcaattctgtctcttg 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggtctatgactgaacatgcagctaggcaggcagggactctctgcaattctgtctcttg 384
Query: 185 cccacagtgttatgcttacaggcctgggcagccacaccttgcctttatcataagaaccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccacagtgttatgcttacaggcctgggcagccacaccttgcctttatcataagaaccag 444
Query: 245 gacctgcatgcaggttcacatccttactcagcaagttctcttacttcctgagtcatcttc 304
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gacctgaatgcagtttcacatccttactcagcaagttctcttacttcctgagtcatcttc 504
Query: 305 ccactcttaaatcataaaagactatgtcaggatccttgaacttcaagagaagacaatttc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccactcttaaatcataaaagactatgtcaggatccttgaacttcaagagaagacaatttt 564
Query: 365 atggaaagactgaaagaacaaattcatctacaaaagagcttccatacacccatgtttatt 424
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atggaaagactgaaagaataaattcatctacaaaagagcttccatacacccatgtttatt 624
Query: 425 gagcaacatggactcaagacaactaactattaagggtcttacttaggtgaagtacccaat 484
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagcaacatggactcaagacaattaactattaagggtcttacttaggtgaagtacccaat 684
Query: 485 agagttgtatttgctgatgtcagagcctgaag 516
||||||||||||||||||||||||||||||||
Sbjct: 685 agagttgtatttgctgatgtcagagcctgaag 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_d08.g1 MSMg01no084_d08.g1 CHROMAT_FILE:
MSMg01no084_d08.g1 PHD_FILE: MSMg01no084_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:11 2005
(517 letters)
>mm_chr13_7514480_7515396
Length = 917
Score = 949 bits (491), Expect = 0.0
Identities = 509/515 (98%)
Strand = Plus / Minus
Query: 1 acttctgaatcaaaagtttaacaaaggtatttcttggcatccaacctgttagcaaaaaag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 886 acttctgaatcaaaagtttaacaaaggtatttcttggtatccaacctgttagcaaaaaag 827
Query: 61 tctatgtagtttctaagataataaaataattatcattaatctctgttgattatttataag 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tctatgtagtttctaacataataaaataattatcattaatctctgttgattatttataag 767
Query: 121 ataaccagctcgccctttagaggagccatcagtaaacaccagagcagcatttgctgttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ataaccagctcgccctttagaggagccatcagtaaacaccagagcagcatttgctgttgt 707
Query: 181 atatgaatatggtatcattgagtaacttgtacacatttcacatggtgctatatgttattt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atatgaacatggtatcattgagtaacttgtacacatttcacatggtgctatatgttattt 647
Query: 241 aatccttattcaaaatatgaaatttgtttcattcctcccatggaaaagaaaaggaatgtg 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 646 aatccttattcaaaatatgaaatttgtttcatccctcccatggaaaagaaaaggaatgtg 587
Query: 301 ttacttggagcaggaaaccttcttaaataaaacagtgagttggtaaacagattattggag 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttacttggagcagcaaaccttcttaaataaaacagtgagttggtaaacagattattggag 527
Query: 361 acaaaagcctgcctctttccctttcatgaaagcagaatgtttcaaacatgcaagtattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 526 acaaaagcctgcctctttccctttcatgaaagcagaatgtttcaaacatgcaactattct 467
Query: 421 gcaaatttgctttgagataaaagccagcagataaagagtgcatctcctttcccactgaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gcaaatttgctttgagataaaagccagcagataaagagtgcatctcctttcccactgaca 407
Query: 481 ttttcccttacacttattatgtgaagcttgagctg 515
|||||||||||||||||||||||||||||||||||
Sbjct: 406 ttttcccttacacttattatgtgaagcttgagctg 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
