Query= MSMg01no084_j14.b1 MSMg01no084_j14.b1 CHROMAT_FILE:
MSMg01no084_j14.b1 PHD_FILE: MSMg01no084_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:40 2005
(242 letters)
>mm_chr13_41188728_41189369
Length = 642
Score = 398 bits (206), Expect = e-115
Identities = 230/238 (96%)
Strand = Plus / Minus
Query: 2 ggaattcttcattttatgcactcaaagaggctaagaatgcaaagtagattgtttttatcc 61
|||||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 ggaattcttcattttaagaaatcaaagaagctaagaatgcaaagtagattgtttttatcc 380
Query: 62 atctctgagtttcatcgttgtcccttcagtagattttaaaacgtatttccgggtccttga 121
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 379 atctctgagtttcatcgttgtcccttcagtagattttaaaacgtatttctgggtccttga 320
Query: 122 acttcatttggtacagtgtctggatatcacgttactgtaaaaatttctaactcaacgaac 181
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 acttcatttgggacagtgtctggatatcacgttactgtaaaaatttctaactcaacgaac 260
Query: 182 aacactataaacaatatcagtggccctagagacatattgataacgatcagttccacag 239
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaaactataaacaaaatcagtggccctagagacatattgataacgatcagttccacag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_j14.g1 MSMg01no084_j14.g1 CHROMAT_FILE:
MSMg01no084_j14.g1 PHD_FILE: MSMg01no084_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:40 2005
(339 letters)
>mm_chr13_41043163_41043902
Length = 740
Score = 627 bits (324), Expect = 0.0
Identities = 336/340 (98%), Gaps = 1/340 (0%)
Strand = Plus / Plus
Query: 1 ctggggagattc-aattcctttgggaccattgttttgagtagtcagatagccagtgggaa 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggggagattccaattcctttgggaccattgttttgagtagtcagatagccagtgggaa 260
Query: 60 gggcacaaggatctctttaaaatatcttccttaggttggcagtaatccaacagtctggtc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggcacaaggatctctttaaaatatcttccttaggttggcagtaatccaacagtctggtc 320
Query: 120 tacagagagagttccagaacagccaggactacacatagttagggagaccctgtctggaaa 179
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tacagagagagttccagaacagccaggacgacacatagttagggagaccctgtctggaaa 380
Query: 180 aacgaaatgaaaggaaacaaaacaaaattaaaactatctttcctgccaggccaggaagat 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacgaaatgaaacgaaacaaaacaaaattaaaactatctttcctgccaggccaggaagat 440
Query: 240 gtgggcaaatcctgtaccactgtttatgagggatttgaacatcttcagattttggtatcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgggcaaatcctgtaccactgtttatgagggatttgaacatcttcagattttggtatcc 500
Query: 300 aaagaagagagggggagggagatcttcgatccaaccccca 339
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 aaagaagagagggggagggaggtcttcgatccaaccccca 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 740
Length adjustment: 9
Effective length of query: 330
Effective length of database: 731
Effective search space: 241230
Effective search space used: 241230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
