Query= MSMg01no084_j23.b1 MSMg01no084_j23.b1 CHROMAT_FILE:
MSMg01no084_j23.b1 PHD_FILE: MSMg01no084_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:42 2005
(544 letters)
>mm_chr13_22137377_22138320
Length = 944
Score = 930 bits (481), Expect = 0.0
Identities = 496/501 (99%), Gaps = 1/501 (0%)
Strand = Plus / Minus
Query: 44 gttgggcataacatgaacctggggctaacatgaaaaatttggagctacttaagtggcttg 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gttgggcataacatgaacctggggctaacatgaaaaatttggagctacttaagtggcttg 885
Query: 104 aaaaatctttctcccagccagccagggtggtacatgcctcgaacctgagtactcggagga 163
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 884 aaaaatctttctcccagccagacagggtggtacatgcctcgaacctgagtactcagagga 825
Query: 164 aaatctcaaagctagcatcagctacttaacatgttagaagccaacatggattacatgaga 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 aaatctcaaagctagcatcagctacttaacatgttagaagccaacatggattacatgaga 765
Query: 224 acatgtctcaaaaacaaaacaaaaaaagcaacacgcacatacacaaagataagatactct 283
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 764 acatgtctcaaaaacaaaac-aaaaaagcaacacgcacatacacaaagataagatactct 706
Query: 284 gtaaccatgtggccttgggcaattaattcactgctattcgtatccttcataaatccactt 343
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 705 gtaaccatgtggccttgggcaattaattcactgctattcgtatccttcataaatcctctt 646
Query: 344 ctgtaaaaagagactatttgagtttctagtatcaaaggatcttttccaaatcaaatatgc 403
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctgtacaaagagactatttgagtttctagtatcaaaggatcttttccaaatcaaatatgc 586
Query: 404 tactatgcttgctgtggttgagaccaatggtggatttctttcatgttttactctcatcga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tactatgcttgctgtggttgagaccaatggtggatttctttcatgttttactctcatcga 526
Query: 464 caatgtcattgtcagggtttgagtctttacataattacacccgacgttatcatcctttca 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caatgtcattgtcagggtttgagtctttacataattacacccgacgttatcatcctttca 466
Query: 524 cagtaaaaggagtgactcagg 544
|||||||||||||||||||||
Sbjct: 465 cagtaaaaggagtgactcagg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_j23.g1 MSMg01no084_j23.g1 CHROMAT_FILE:
MSMg01no084_j23.g1 PHD_FILE: MSMg01no084_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:42 2005
(430 letters)
>mm_chr13_22041317_22042146
Length = 830
Score = 808 bits (418), Expect = 0.0
Identities = 427/430 (99%)
Strand = Plus / Plus
Query: 1 ttgatattttaggaatcagtgaccttcaaggatgtggtcgtgaacttcactcaggaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgatattttaggaatcagtgaccttcaaggatgtggtcgtgaacttcactcaggaagaa 260
Query: 61 tggaaacacctggatcctatacagagagatttgttcagagatgtgacactggaaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaacacctggatcctatacagagagatttgttcagagatgtgacactggaaaattat 320
Query: 121 acacatctggtctctataggtgagtgtggtgccctccccccaacttaaaatcaggatgta 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 acacatctggtctctataggtgagtgtggtgccctccccccaagttaaaatcaggatgta 380
Query: 181 ggaagagggtacacacctggtctctagcgaagggtgaccttaagtttgtttggttttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagagggtacacacctggtctctagcgaagggtgaccttaagtttgtttggttttggt 440
Query: 241 ttatatggtgtggcaaacacacaccttgtctttttaggtgaggatagctccaagtttaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatatggtgtggcaaacacacaccttgtctttttaggtgaggatagctccaagtttaga 500
Query: 301 tgggatgtgggaggcacgttattgtgcttagatgtgattggcatctaaatttcgggacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggatgtgggaggcacgttattgtgcttagatgtgattggcatctaaatttcgggacca 560
Query: 361 gaaattttaaattttagaagtttctcctcattattaggtggagtattctcctctccttag 420
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gacattttaaattttagaagtttctcctcattattaagtggagtattctcctctccttag 620
Query: 421 atgagcttct 430
||||||||||
Sbjct: 621 atgagcttct 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
