Query= MSMg01no084_p20.b1 MSMg01no084_p20.b1 CHROMAT_FILE:
MSMg01no084_p20.b1 PHD_FILE: MSMg01no084_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:10 2005
(513 letters)
>mm_chr13_59524926_59525838
Length = 913
Score = 754 bits (390), Expect = 0.0
Identities = 428/448 (95%), Gaps = 13/448 (2%)
Strand = Plus / Minus
Query: 65 gaggtggagatctcactacattcctctcattgtcctagaattcttgggcttacacaaacc 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaggtggaggtctcactacattcctctcattgtcctagaattcttgggcttacacaaacc 560
Query: 125 ctttctctcagcccgtggaggagctccagggccctgcccctgatactggcggcacagcta 184
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 ctttctctcagcctgtggaggagctccagggccctgcccctgacactggcggcacagcta 500
Query: 185 gtttcagtttgaatctcagagggcctgaaccatgctcagaccacacagaagctgtgaacg 244
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 499 gtttcaacttgaatctcagagggcctgaacaatgctcagaccacacagaagctgtgaacg 440
Query: 245 cttgcccttcaattactgtgctttggacttgctggcaaaaggtgaccctggttaccattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttgcccttcaattactgtgctttggacttgctggcaaaaggtgaccctggttaccattc 380
Query: 305 cattcttaaatcaattttagcatcacacaatttcacactagcagcccccgaattgtgaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cattcttaaatcaattttagcatcacacaatttcacactagcagcccccgaattgtgaca 320
Query: 365 ccgggattggactctactttcagaagttgtttcaaatgctctcacttgcagaatccccaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccgggattggactctactttcagaagttgtttcaaatgctctcacttgca---------- 270
Query: 425 atgaatctttttctcttctttattaattcaaagtggctcttccgagtgttccataaaggt 484
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 269 --gaatctttttctcttctttattaattcaaagtggctcttccgagtgttccctaaaggt 212
Query: 485 agcttctatat-aacacgtccttgtgga 511
||||||||||| ||||||||||||||||
Sbjct: 211 agcttctatataaacacgtccttgtgga 184
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_p20.g1 MSMg01no084_p20.g1 CHROMAT_FILE:
MSMg01no084_p20.g1 PHD_FILE: MSMg01no084_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:10 2005
(196 letters)
>mm_chr13_59430830_59431426
Length = 597
Score = 373 bits (193), Expect = e-108
Identities = 196/197 (99%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 1 tctggggatatccacacgtgctc-tctttagggatactttttctcgttgccatggagcaa 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggggatatccacacgtgctcatctttagggatactttttctcgttgccatggagcaa 260
Query: 60 acaccaagtgcttatgaaaatatatgcaagttttattttcatgcgtttcaagtctctgcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaccaagtgcttatgaaaatatatgcaagttttattttcatgcgtttcaagtctctgcc 320
Query: 120 cccttcaggaggaggtgctacatcatctggctaccaattgctctctgaccagagtatccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccttcaggaggaggtgctacatcatctggctaccaattgctctctgaccagagtatccc 380
Query: 180 atctgcagagaggctgg 196
|||||||||||||||||
Sbjct: 381 atctgcagagaggctgg 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 597
Length adjustment: 8
Effective length of query: 188
Effective length of database: 589
Effective search space: 110732
Effective search space used: 110732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
