Query= MSMg01no085_j16.b1 MSMg01no085_j16.b1 CHROMAT_FILE:
MSMg01no085_j16.b1 PHD_FILE: MSMg01no085_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:35 2005
(166 letters)
>mm_chr13_60433158_60433723
Length = 566
Score = 255 bits (132), Expect = 8e-73
Identities = 158/168 (94%), Gaps = 4/168 (2%)
Strand = Plus / Plus
Query: 1 tgtctaagggtatgactttgagtttttctcgagtgggtgtctcagagttatgttttgtgg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tgtctaagggtatgactttgagtttttctcgcgtgggtgtctcagagttatgttttgtgg 260
Query: 61 gggcaaaaagaccttcttaactacaggaaatataaaaatgtcccacacaccccctttctg 120
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |
Sbjct: 261 gggcaaaaagaccttcttaactacaggaaataaaaaaatgtcccacatacaccctttcgg 320
Query: 121 atatgaaaccata--cattctcaggcatagctatgccaggttagaatc 166
||||||||| || |||||||||||| ||||||||||||||||||||
Sbjct: 321 atatgaaac--taggcattctcaggcagagctatgccaggttagaatc 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no085_j16.g1 MSMg01no085_j16.g1 CHROMAT_FILE:
MSMg01no085_j16.g1 PHD_FILE: MSMg01no085_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:35 2005
(208 letters)
>mm_chr13_60557403_60558012
Length = 610
Score = 360 bits (186), Expect = e-104
Identities = 201/210 (95%), Gaps = 8/210 (3%)
Strand = Plus / Minus
Query: 4 aggcgctgcagcagctgacaggtgagttgtgtgttcaggcataaaccggtcagggtggag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aggcgctgcagcagctgacaggtgagttgtgtgttcaggcataaaccggtcagggtggag 351
Query: 64 tccagaggaattcacaaagactgtggtggagtccaatactgacagaaggtt-----cccc 118
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 350 tccagaggaattcacaaagactgtgggggagtccaatactgacagaaggtttttttcccc 291
Query: 119 cccccctttttcttctaattccaacgtcattttctcctctttcctagaagaggcacttag 178
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccc---tttttcttctaattccaacgtcattttctcctctttcctagaagaggcacttag 234
Query: 179 cgaccttttgaatggacttatatttagtac 208
||||||||||||||||||||||||||||||
Sbjct: 233 cgaccttttgaatggacttatatttagtac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 610
Length adjustment: 9
Effective length of query: 199
Effective length of database: 601
Effective search space: 119599
Effective search space used: 119599
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
