Query= MSMg01no086_g15.b1 MSMg01no086_g15.b1 CHROMAT_FILE:
MSMg01no086_g15.b1 PHD_FILE: MSMg01no086_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:09 2005
(247 letters)
>mm_chr13_35609339_35609985
Length = 647
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Minus
Query: 1 accctcacccagggtgaggatttcagctagagcatatctgcttgtgtactctgtcctgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 413 accctcacccagggtgaggatttcagctagagcatatctgcttgtgtactctgtaatgtg 354
Query: 61 agagcaagggatttgttgacttactcctccctgagataaaggcaggtcccctgagaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agagcaagggatttgttgacttactcctccctgagataaaggcaggtcccctgagaagga 294
Query: 121 actaggtcacatacattttcctggaggtcagagttctaatctgtggcattttgtacaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 actaggtcacatacattttcctggaggtcagagttctaatctgtggcattttgtacaata 234
Query: 181 aaagattctcatgtatgccttctgttttttaaagtgtgtgtgtgtgtgtgtgtgtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaagattctcatgtatgccttctgttttttaaagtgtgtgtgtgtgtgtgtgtgtgtgtg 174
Query: 241 tgtgtg 246
||||||
Sbjct: 173 tgtgtg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_g15.g1 MSMg01no086_g15.g1 CHROMAT_FILE:
MSMg01no086_g15.g1 PHD_FILE: MSMg01no086_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:09 2005
(246 letters)
>mm_chr13_35510916_35511560
Length = 645
Score = 439 bits (227), Expect = e-128
Identities = 242/247 (97%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 actcttg-aattgattatctttctttttcttcctcccttcctttcttcctctttctcttc 59
||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 200 actcttgtaattgattatctttctttttcttcctcccttcctttcttcatttttctcttc 259
Query: 60 ccttcctggcccttctttatctctattttatttttatacagttgttctaatgttttaaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccttcctggcccttctttatctctattttatttttatacagttgttctaatgttttaaac 319
Query: 120 ccatggcattgtgcacaatgaaaacacactcagctactgagtcactcccaacccaagtcc 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccatggaattgtgcacaatgaaaacacactcagctactgagtcactcccaacccaagtcc 379
Query: 180 ctatttctctctcttacaccattacttttctttctacttcatcagaggctcacaaataca 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 c-atttctctctcttacaccattacttttctttctacttcatcagaggctcacaaataca 438
Query: 240 atgtgtg 246
|||||||
Sbjct: 439 atgtgtg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
