Query= MSMg01no086_n09.b1 MSMg01no086_n09.b1 CHROMAT_FILE:
MSMg01no086_n09.b1 PHD_FILE: MSMg01no086_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:43 2005
(317 letters)
>mm_chr13_43412075_43412793
Length = 719
Score = 456 bits (236), Expect = e-133
Identities = 249/254 (98%), Gaps = 2/254 (0%)
Strand = Plus / Plus
Query: 66 caagatggctggcttcttcctccccctcttgacctgagacaaaagccagtggcttaaaac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caagatggctggcttcttcctccccctcttgacctgagacaaaagccagtggcttaaaac 325
Query: 126 aaaggctcgaaggttctttctcccatccgaagcttccctgcgaatgtattgcctcatcaa 185
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 326 aaaggctagaaggttctttctcccatccgaagctttcctgcgaatgtattgcctcatcaa 385
Query: 186 agccccaaggccagagcgggacttgttacatagctgtgggctgttcagccatcctgtctc 245
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agccccaaggccagagcaggacttgttacatagctgtgggctgttcagccatcctgtctc 445
Query: 246 tcttcaaactgatcaaccctaaattaggagaggaaaccttcagagact--aaaaaccctg 303
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 446 tcttcaaactgatcaaccctaaattaggagaggaaaccttcagagactttaaaaaccctg 505
Query: 304 gacctcggtcaagc 317
||||||||||||||
Sbjct: 506 gacctcggtcaagc 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 719
Length adjustment: 9
Effective length of query: 308
Effective length of database: 710
Effective search space: 218680
Effective search space used: 218680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_n09.g1 MSMg01no086_n09.g1 CHROMAT_FILE:
MSMg01no086_n09.g1 PHD_FILE: MSMg01no086_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:43 2005
(290 letters)
>mm_chr13_43498794_43499484
Length = 691
Score = 524 bits (271), Expect = e-153
Identities = 286/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 caggatagacaggaaagcaaagtgagaccatgtatcaaaaaataaaattaaaaaaagtac 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caggacagacaggaaagcaaagtgagaccatgtatcaaaaaataaaattaaaaaaagtac 432
Query: 61 ctccattccccaagtacatttcttagaaatatcaatttgctttgctagtcagatagttca 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctccattccccaagtacctttcttagaaatatcaatttgctttgctagtcagatagttca 372
Query: 121 gatcctcagacattgatgtagc-aaatattgtatggccctgattgaaagatgatttttaa 179
|||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 371 gatcctcagacactgatgtagcaaaatattttatggccctgattgaaagatgatttttaa 312
Query: 180 aatggttgttaattgctattttcactttctaattctttttccttagaaacccacaatctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aatggttgttaattgctattttcactttctaattctttttccttagaaacccacaatctg 252
Query: 240 ccaaagcaacctccacttgccctagccatgggacaggccacacagtgtcta 290
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccaaagcaacctccacttgccctagccatgggacaggccacacagtgtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|