Query= MSMg01no092_e24.b1 MSMg01no092_e24.b1 CHROMAT_FILE:
MSMg01no092_e24.b1 PHD_FILE: MSMg01no092_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:08 2005
(564 letters)
>mm_chr13_110587814_110588775
Length = 962
Score = 1015 bits (525), Expect = 0.0
Identities = 552/563 (98%), Gaps = 6/563 (1%)
Strand = Plus / Minus
Query: 4 ggaattccaggcatcc--gcaactgcctagggacaaatagaggttgtaaagcgtttgacc 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggaattccaggca--caggcaactgcctagggacaaatagaggttgtaaagcgtttgacc 684
Query: 62 aacactggactggggtttaggaaaatttcagagtttgaaaagatagtccttacggtctgc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aacactggactggggtttaggaaaatttcagagtttgaaaagatagtccttacggtctgc 624
Query: 122 ctgttggttcctagggctggttccctgtggtcacacaggttggttgaaacgtgggagtaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctgttggttcctagggctggttccctgtggtcacacaggttggttgaaacgtgggagtaa 564
Query: 182 acactggctttcaccttccaccggagtctttaaaaaaaaaaaattaacagatttggaact 241
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 563 acactggctttcaccttccaccggagtcttt--aaaaaaaaaattaatagatttggaact 506
Query: 242 aagagtgactacaacttggagtagcttggcgaagttgtagtatcatatcgctggcctttg 301
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 505 aagagtgactacaacttggagtagcttggcgaagttgtagtatcatattgctagcctttg 446
Query: 302 caagtgagaaatagatgcacaatggagatttaagtttaaatcagtgtgtattcagtgcta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagtgagaaatagatgcacaatggagatttaagtttaaatcagtgtgtattcagtgcta 386
Query: 362 tctgggcaaagccttcagactaagacaatacacacacaagcacacacatacacacatatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgggcaaagccttcagactaagacaatacacacacaagcacacacatacacacatatt 326
Query: 422 tcatacatatgtgtgtatgtgtaatgcaacatgcttctggaattttctcagaatctccat 481
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 325 tcatacatatgtgtgtatgtgtaatgcaacatgcttctggagtttgctcagaatctccat 266
Query: 482 tatgctatgcataagtatgtgtttttccaagagatttctggaacttggcaatactgaggg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgctatgcataagtatgtgtttttccaagagatttctggaacttggcaatactgaggg 206
Query: 542 tttttggtttggtttggtttggt 564
|||||||||||||||||||||||
Sbjct: 205 tttttggtttggtttggtttggt 183
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 962
Length adjustment: 10
Effective length of query: 554
Effective length of database: 952
Effective search space: 527408
Effective search space used: 527408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_e24.g1 MSMg01no092_e24.g1 CHROMAT_FILE:
MSMg01no092_e24.g1 PHD_FILE: MSMg01no092_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:08 2005
(600 letters)
>mm_chr13_110496652_110497651
Length = 1000
Score = 1096 bits (567), Expect = 0.0
Identities = 591/599 (98%)
Strand = Plus / Plus
Query: 1 aaatcaattcagacttattaaaaggagtcttctttttctcaagttccacaacccattgca 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 aaatcaattcagacttattaaaaggaggcttctttttctcaagttccacaacccattgca 260
Query: 61 gaatacaccatgtagatttttgtctacattttaggaataaaaccccattatgctgctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatacaccatgtagatttttgtctacattttaggaataaaaccccattatgctgctccc 320
Query: 121 ttcaatgtggcattgaacgtaaggagtgggaacgcccctgcttgccattggagcttttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaatgtggcattgaacgtaaggagtgggaacgcccctgcttgccattggagcttttga 380
Query: 181 tttgctaagtgtattttgttcagtcattgcatttaggcttcggtggggttttccagctgc 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tttgctaagtgtattttgttcagtcattgcatttaggctttggtggggttttccagctgc 440
Query: 241 catgacggactgtcagcagctggaagagacaggttttccttttccttgtcacatctctgg 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 catgacggactgtcagcagctggaagagacaggttttccttttccttgtcgcatctctgg 500
Query: 301 gtttaatctaacagccccaccttttaaaagttttctctgtgtgctaggatttaggtgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttaatctaacagccccaccttttaaaagttttctctgtgtgctaggatttaggtgtaa 560
Query: 361 tttataagcactcaagtgttctacaacagcttcaatagcatacactagaaaatccaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttataagcactcaagtgttctacaacagcttcaatagcatacactagaaaatccaccct 620
Query: 421 ggccatgatggtgcagtttgtatggcaacatggggtagcatcgagatgacaaggagatct 480
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 ggccatgatggtgcagttcgtatggcagcatggggtagcatcgagatgacaaggagatct 680
Query: 481 gtcaattgtcagcatggagctgcctccaagagaggaaaactggttatgatgtgaaaacat 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 681 gtcaattgtcagcatggagctgcctccaagagaggaaaacaggttatgatgtgaaaatat 740
Query: 541 catcctatgttcacaagctcgtgaacataccatgagggtattttggggtgtttttccta 599
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catcctatgttcacaagctcatgaacataccatgagggtattttggggtgtttttccta 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space: 584100
Effective search space used: 584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
