Query= MSMg01no094_o09.b1 MSMg01no094_o09.b1 CHROMAT_FILE:
MSMg01no094_o09.b1 PHD_FILE: MSMg01no094_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:44 2005
(234 letters)
>mm_chr13_103608424_103609057
Length = 634
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%)
Strand = Plus / Minus
Query: 1 gcccaaacaatgattatttcagagaaaagccctcacttacatcttgctgtgtggatgaga 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 434 gcccaaacaatgattatttcagagaaaagacctcacttacatcttgctgtgtggatgaga 375
Query: 61 ttcctgcccactggactccataggaacatttagaatgtgttaagtaggaaggaccagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttcctgcccactggactccataggaacatttagaatgtgttaagtaggaaggaccagctc 315
Query: 121 agctctagtattcactctttaactaaagggagctaaaagggaaaggtttaaatgagcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agctctagtattcactctttaactaaagggagctaaaagggaaaggtttaaatgagcgtc 255
Query: 181 acctttacagtacatttaggaagctatacgaatgtgcagcctttcattaaaatg 234
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 254 acctttacagtacatttaggaagctatatgaatgtgcagcctttcattaaaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no094_o09.g1 MSMg01no094_o09.g1 CHROMAT_FILE:
MSMg01no094_o09.g1 PHD_FILE: MSMg01no094_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:44 2005
(443 letters)
>mm_chr13_103473658_103474500
Length = 843
Score = 797 bits (412), Expect = 0.0
Identities = 436/444 (98%), Gaps = 1/444 (0%)
Strand = Plus / Plus
Query: 1 caggacagtcagggctatacagagaaaccctgtcttg-aaaaccaaaacagaaaaataca 59
||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||
Sbjct: 200 caggacagtcagggctatacagagaaatcctgtcttgaaaaaccaaaaaagaaaaataca 259
Query: 60 catgatccctctgagggtcagagtgatgaagacactccttcctgagcacagaggtccatg 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 catgatccctctgaaggtcagagtgatgaagacactccttcctgagcacagaggtccatg 319
Query: 120 gattcaagtttccaccaaatgcctgtcaacctcccgctccgaagatgcagtagttcctac 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 gattcaagtttccaccaaatgcccgtcaacctcccgctccgaagatgcagtagttcctac 379
Query: 180 tattgggtttgttttgttattggttgtaagtcagaagtcagaattgctcaatattagatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tattgggtttgttttgttattggttgtaagtcagaagtcagaattgctcaatattagatt 439
Query: 240 agaactagaaaatgcaagcatttccgcatttagttcttatatttttaaatcaaatctaag 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaactagaaaatgcaatcatttccgcatttagttcttatatttttaaatcaaatctaag 499
Query: 300 aagcatgaattgctctaaaaaagcaacctccaccctctaatccttaccccatgtccccaa 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 500 aagcatgaattgctctaaaaaagcaacctccaccctctaatccttaccccatgtcctcaa 559
Query: 360 aaccctaaatatcctttaacatatcccaaccacacaggggactaacaggattatgtagac 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 aaccctaaatatcctttaacatatcccaaccacacaggggactaacgggattatgtagac 619
Query: 420 tgtgtcttatcagtcctgtttaca 443
||||||||||||||||||||||||
Sbjct: 620 tgtgtcttatcagtcctgtttaca 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
