Query= MSMg01no098_d24.b1 MSMg01no098_d24.b1 CHROMAT_FILE:
MSMg01no098_d24.b1 PHD_FILE: MSMg01no098_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:17 2005
(635 letters)
>mm_chr13_82743976_82745010
Length = 1035
Score = 1181 bits (611), Expect = 0.0
Identities = 626/631 (99%)
Strand = Plus / Plus
Query: 5 gaattcaagcagttccattaagttccactcagtttgtgcagacaatgcagtcagtacagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagcagttccattaagttccactcagtttgtgcagacaatgcagtcagtacagt 264
Query: 65 ttagttcatggaattcagaagtatttttaacacagagcaattcactgggaaacctagaga 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagttcatggaattcagaagtatttttaacacagagcaattcactgggaaacctagaga 324
Query: 125 agcaagtttggagaggagcttgaaccagaacagctgagtgaaactagccaaccaattttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcaagtttggagaggagcttgaaccagaacagctgagtgaaactagccaaccaattttc 384
Query: 185 agaaagtactaaaaatgataaggcttttcagcaataagcttttaagacaaaaactacatc 244
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 385 agaaagtactaaaaatgataaggcttttcagcaataagcctttaagacaaaaactatatc 444
Query: 245 tggtgaataaaagttacacttacataaataaatttatatctataatccagaataaaactc 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggtgaataaaagttacactcacataaataaatttatatctataatccagaataaaactc 504
Query: 305 aagaccaagtggattaaagacctcaacataaacccagatacactaaacctgatagaagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagaccaagtggattaaagacctcaacataaacccagatacactaaacctgatagaagaa 564
Query: 365 aaatttgggagtaaccttgacctcttgaaacagaagacaactttcagaacagaacagcaa 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaatttgggaataaccttgacctcttgaaacagaagacaactttcagaacagaacagcaa 624
Query: 425 tcatacattcactatgatcaacaattaatgggacttaatgaaactgaaaagcttctataa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcatacattcactatgatcaacaattaatgggacttaatgaaactgaaaagcttctataa 684
Query: 485 agtagcagtttggtgttccatttttcatttcttcccttgggtgtctgggacaatgtacat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtagcagtttggtgttccatttttcatttcttcccttgggtgtctgggacaatgtacat 744
Query: 545 tgagcaggaaaggataaaatgaagtccagaatgggtgagacagcaagattctggttggca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgagcaggaaaggataaaatgaagtccagaatgggtgagacagcaagattctggttggca 804
Query: 605 gtgaatgcctgaagggcgtgggggtgtctct 635
|||||||||||||||||||||||||||||||
Sbjct: 805 gtgaatgcctgaagggcgtgggggtgtctct 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_d24.g1 MSMg01no098_d24.g1 CHROMAT_FILE:
MSMg01no098_d24.g1 PHD_FILE: MSMg01no098_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:18 2005
(578 letters)
>mm_chr13_82855655_82856632
Length = 978
Score = 955 bits (494), Expect = 0.0
Identities = 515/522 (98%), Gaps = 1/522 (0%)
Strand = Plus / Minus
Query: 1 aataatcagaaatgaaactggggaaatatagaaaatattagagccattcagatttgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aataatcagaaatgaaactggggaaatatagaaaatattagagccattcagatttgtgtg 463
Query: 61 caaatgctgtttatttgctaatatagcctcaagaaagctcttaaatctctttaacttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 462 caaatgctgtttatttgctaatatagcctcaagaaagctcttaaatctctttaacatttt 403
Query: 121 tcatgttgaaatgtatacattaattaccacagaaagactacagctaccaataacctatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcatgttgaaatgtatacattaattaccacagaaagactacagctaccaataacctatga 343
Query: 181 aatgtattatatcatatacaataataggtgtggtgatagttgatcacaagccaggaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aatgtattatatcatatacaataataggtgtggtgatagttgatcacaagccaggaatct 283
Query: 241 gagtttaagtcagtgacttattcttagtgacttgaaacccacattcatttataaatttgg 300
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 282 gagtttaagtcagtgacttattcttagtgacttgaaacccacattcaattagaaatttgg 223
Query: 301 ttttgatatcatttaatgaagaaaaatatttttagaaaggtagatagtaatg-tttttta 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 222 ttttgatatcatttaatgaagaaaaatatttttagaaaggtagatagtaatgatttttta 163
Query: 360 gactttgcaagctctggggcctttattgtaattactaggttctgttgttatatgattagc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 162 gactttgcaagctctggggcctttattgtaattactaggttctgttgttatatgattatc 103
Query: 420 tgactgcaatatatacatgacaaggtgttgctaaatttcaacagttgtacccccagccac 479
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 102 tgactgcaatatatacatgacaaggtgttgctaaatttcaacaattgtacccccagtcac 43
Query: 480 gtattaggaaatactgagtctacaaattagctttttaatcta 521
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 gtattaggaaatactgagtctacaaattagctttttaatcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
