CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTGTTTACCTCTTCACCCTATTTTTTAATTGAATTATTTGGTTAT
TTGGATGTTAACTTCTTGTATTCTTTATATATTTTGGATATTAACCTTCT
ATCAGATATAGGGTTATTGAAGATTTTTTCCACAATCTGTAGGTAACCAA
TTTGTAAATTTTTAGTATATTTTTATCCCGTCTATTGTTAGAAACAGAAA
ATCAATTCATTTAATATCAAAATTAAAAATAAATTAGGAAATTTTGCTAT
AGTACCTGCTTCCTTCATGAAGCATCATCTGTAATATTTCAGGATGTGAG
AAAGAAAGAAAAGTATGGAATATAACTTGCAGGGGCTATGGCATATAAAT
AGTAGAGCATGTCGAATCTTTAACATTCCCAAGCCAATACCCACACCAGT
CTCAAAATTCAGTGGAAGTTAGTTGAAGAGACTGGGTCCTTCATGTTAAG
TGGAGGCTTCATGACTTATCCCAGACTTTTGTTTCCTGGAAGCAACAAGG
TCACCTATTTCATTCCATAAAATATATCCAGCATAGTGCACTGTTTTGCT
TCAAGTACTTAAACACTCAGGTACATCGAGACATTAATTGAAAGCTCTGA
AGTTTAAAGCAAAATTAATATGTTTCCTCCTGTAAGAAAATCATGTCAAG
CACATACAAGTTGTGTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGGCCAAGAAGCAGGAGTGGGTGGT
TAGGGGAGCAGGGCAGAGGGATGGTATAGGGAACTTTTGGGATAGCATAT
GAAATGTATATAAAGAAACTATCTAAAAAAAATTGCAAAGGAAAAAAAAA
AAGAATATAAGAGATAGAAGAGAGAATCTCAGGTGCAGACCATGCCATAG
AAATCATTGACACAACAATCAAAGAAAATGCAAACTACAAAAAGGTCGTA
ACCCAAAACATCCAGGAAATCCAGGACAAAATGAGAAAACCCAACCTAAG
GATAATAGGTCTAGAAGAGAGCAAAGATTCCCAAATTAGAGGGCCAGTAA
ATTCCTTCAACAAAATTATAGAAGAAAACTTCCCTAACCTAAAGAAAGAG
ATGCCCTTAAACAGAGAAGGAGCCTACAGAACTCCAAATAGATTGGGCCA
GAAAAGAAAATAGTAAAACAAACAAACAAACAAACAAACAAACAAACAAA
CATACAAACAAAAACCCTATCCACAAAACAAAGAAAGAATACTAAAAGCA
GTAAAAGAAAAAGGTCATATAAACAAATAACATATAAGGGAAGAACTAGA
TGTCTCAACAGAAGACTGGAAGCTAAAAGATCCTGCGGCAGATATCACAC
AGACCCTTAAGAGAATACCAATG

Query= MSMg01no100_a16.b1 MSMg01no100_a16.b1 CHROMAT_FILE:
MSMg01no100_a16.b1 PHD_FILE: MSMg01no100_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:47 2005
         (631 letters)



>mm_chr13_4915268_4916298
          Length = 1031

 Score = 1089 bits (563), Expect = 0.0
 Identities = 582/589 (98%), Gaps = 3/589 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   tatttggttatttggatgttaacttcttgtattctttatatattttggatattaaccttc 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 tatttggttatttggatgttaacttcttgtattctttatatattttggatattaaccttc 972

                                                                        
Query: 106  tatcagatatagggttattgaaga-ttttttccacaatctgtaggtaaccaatttgtaaa 164
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 971  tatcagatatagggttattgaagatttttttccacaatctgtaggtaaccaatttgtaaa 912

                                                                        
Query: 165  tttttagtatatttttatccc--gtctattgttagaaacagaaaatcaattcatttaata 222
            |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 911  tttttagtatatttttatcccaagtctattgttagaaacagaaaatcaattcatttaata 852

                                                                        
Query: 223  tcaaaattaaaaataaattaggaaattttgctatagtacctgcttccttcatgaagcatc 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  tcaaaattaaaaataaattaggaaattttgctatagtacctgcttccttcatgaagcatc 792

                                                                        
Query: 283  atctgtaatatttcaggatgtgagaaagaaagaaaagtatggaatataacttgcaggggc 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  atctgtaatatttcaggatgtgagaaagaaagaaaagtatggaatataacttgcaggggc 732

                                                                        
Query: 343  tatggcatataaatagtagagcatgtcgaatctttaacattcccaagccaatacccacac 402
            |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 731  tatggcatgtaaatagtagagcatgtcgaatctttaacattcctaagccaatacccacac 672

                                                                        
Query: 403  cagtctcaaaattcagtggaagttagttgaagagactgggtccttcatgttaagtggagg 462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671  cagtctcaaaattcagtggaagttagttgaagagactgggtccttcatgttaagtggagg 612

                                                                        
Query: 463  cttcatgacttatcccagacttttgtttcctggaagcaacaaggtcacctatttcattcc 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 611  cttcatgacttatcccagacttttgtttcctggaagcaacaaggtcacctatttcatccc 552

                                                                        
Query: 523  ataaaatatatccagcatagtgcactgttttgcttcaagtacttaaacactcaggtacat 582
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551  ataaaatatagccagcatagtgcactgttttgcttcaagtacttaaacactcaggtacat 492

                                                             
Query: 583  cgagacattaattgaaagctctgaagtttaaagcaaaattaatatgttt 631
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491  cgagacattaattgaaagctctgaagtttaaagcaaaattaatatgttt 443


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)