Query= MSMg01no102_f20.b1 MSMg01no102_f20.b1 CHROMAT_FILE:
MSMg01no102_f20.b1 PHD_FILE: MSMg01no102_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:56 2005
(251 letters)
>mm_chr13_112003667_112004319
Length = 653
Score = 445 bits (230), Expect = e-129
Identities = 243/248 (97%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 1 tctttatgctctctgctctgttattcagtgagcatatcagaaggtacggtttgtttttaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tctttatgctttctgctctgttattcagtgagcatatcagaaggtacggtttgtttttaa 389
Query: 61 tgaatatgagctggcactcagaactt--agtctcactttctagatggataaactatctgt 118
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 388 tgaatatgagctggcactcagaacttagagtctcactttctagatggataaactatctgt 329
Query: 119 ttagacatgtacttcatgggatgtgatgttaaattcccaagcatcaaatctattttattg 178
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttagacatgcacttcgtgggatgtgatgttaaattcccaagcatcaaatctattttattg 269
Query: 179 tcttctttgtttacaaaatgagaccctttgatctgtcacatctttgacccccagcccaga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcttctttgtttacaaaatgagaccctttgatctgtcacatctttgacccccagcccaga 209
Query: 239 ctcaggta 246
||||||||
Sbjct: 208 ctcaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 653
Length adjustment: 9
Effective length of query: 242
Effective length of database: 644
Effective search space: 155848
Effective search space used: 155848
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_f20.g1 MSMg01no102_f20.g1 CHROMAT_FILE:
MSMg01no102_f20.g1 PHD_FILE: MSMg01no102_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:56 2005
(165 letters)
>mm_chr13_111868383_111868948
Length = 566
Score = 298 bits (154), Expect = 1e-85
Identities = 163/166 (98%), Gaps = 1/166 (0%)
Strand = Plus / Plus
Query: 1 taactcaccgtgaaaaa-ttcagcttgttctggtttgcttaattgttttgtctctaggct 59
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taactcaccatgaaaaaattcagcttgttctggtttgcttaattgttttgtctctaggct 260
Query: 60 gtcttttggtggtcattaaatggcgcaaaaaaaaaattcttttaccatttaaaacataat 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttttggtggtcattaaatggcgaaaaaaaaaaattcttttaccatttaaaacataat 320
Query: 120 gaacatactggatctcgaaaacacgggcctggaccacattgtgtga 165
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacatactggatctcgaaaacacgggcctggaccacattgtgtga 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 566
Length adjustment: 8
Effective length of query: 157
Effective length of database: 558
Effective search space: 87606
Effective search space used: 87606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
