Query= MSMg01no103_c18.b1 MSMg01no103_c18.b1 CHROMAT_FILE:
MSMg01no103_c18.b1 PHD_FILE: MSMg01no103_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:00 2005
(248 letters)
>mm_chr13_110550248_110550897
Length = 650
Score = 410 bits (212), Expect = e-119
Identities = 239/248 (96%), Gaps = 4/248 (1%)
Strand = Plus / Minus
Query: 1 aaatgattactatttcggcggacagacaaatgtaatgagaccgacagatggatggatcgg 60
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 447 aaatgattgctatttcggcggacagacaaatggaatgagaccgacagatggatggat-gg 389
Query: 61 ggg-ggg-catttaagcagtacttgaagcattgacacta-tctgtttcttaactttcatt 117
||| ||| || |||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 388 gggcgggacagttaagcagtacttgaagcattgacactattctgtttcttaactttcgtt 329
Query: 118 tactattattatttctgctttagatattactgcatatatagtatgccacatttccaaatg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tactattattatttctgctttagatattactgcatatatagtatgccacatttccaaatg 269
Query: 178 agactgagaaaagcaacctcccccaggctctggctgctggcctttggcctgctgactttt 237
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 268 agactgagaaaagcaacctcccccaggctctggctgccggcctttggcctgctgactttt 209
Query: 238 agcctata 245
||||||||
Sbjct: 208 agcctata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 650
Length adjustment: 9
Effective length of query: 239
Effective length of database: 641
Effective search space: 153199
Effective search space used: 153199
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_c18.g1 MSMg01no103_c18.g1 CHROMAT_FILE:
MSMg01no103_c18.g1 PHD_FILE: MSMg01no103_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:00 2005
(298 letters)
>mm_chr13_110406112_110406809
Length = 698
Score = 569 bits (294), Expect = e-166
Identities = 297/298 (99%)
Strand = Plus / Plus
Query: 1 acactagagggcacaaaaggatatgtttaagtcaaggacttctcttcaacagaacgttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acactagagggcacaaaaggatatgtttaagtcaaggacttctcttcaacagaacgttac 260
Query: 61 aattaggaaaacctgcctcaagtaaagccttgtgcccccatgggcatgatttttctgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattaggaaaacctgcctcaagtaaagccttgtgcccccatgggcatgatttttctgaaa 320
Query: 121 tgctgacctgcagctctctagtcctcacagagcacaagaaacggcagcggctgacttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgacctgcagctctctagtcctcacagagcacaagaaacggcagcggctgacttctg 380
Query: 181 ggtctctttaataacaacctcctggctggctttctttccttcacttttatcgctctcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtctctttaataacaacctcctggctggctttctttccttcacttttatcgctctcagc 440
Query: 241 cttttataatatatggtccacataactactcatggtgggatttttttcattttcctat 298
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttataaaatatggtccacataactactcatggtgggatttttttcattttcctat 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
