MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-105N05
Chromosome	13 (Build37)
Map Location	57,768,375 - 57,889,291
singlet/doublet	doublet
Overlap gene	Spock1
Upstream gene	Smad5, EG627415, Trpc7, LOC100040995
Downstream gene	Klhl3, Hnrpa0, 5133401N09Rik, Ubqln1, LOC671252, Gkap1, Kif27, Hnrpk, Rmi1, LOC100041086, Slc28a3, LOC100041510, LOC435361
Link	Open Mouse BAC browser

Click to get alignment info.

name	Smad5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17129 MGI:1328787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627415 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Trpc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Spock1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20745 MGI:105371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klhl3 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 19 Proteins

name	Hnrpa0 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77134 MGI:1924384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 244 ESTs, 50 Proteins

name	5133401N09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75731 MGI:1922981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ubqln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56085 MGI:1860276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC671252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins pseudo : _no_value

name	Gkap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56278 MGI:1891694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75050 MGI:1922300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnrpk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15387 MGI:99894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rmi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74386 MGI:1921636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041086 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Slc28a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114304 MGI:2137361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041510 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	LOC435361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Smad5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734445 GeneID:17129 MGI:1328787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 5 (Drosophila) transcript_id : NM_008541.2

name	EG627415 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395150 GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG627415 transcript_id : XM_892071.2

name	Trpc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129964 GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 7 transcript_id : NM_012035.2

name	Spock1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50053937 GeneID:20745 MGI:105371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 transcript_id : NM_009262.2

name	Klhl3 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264250 GeneID:627648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 19 Proteins product : kelch-like 3 (Drosophila) transcript_id : XM_354754.6

name	Hnrpa0 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395153 GeneID:77134 MGI:1924384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 244 ESTs, 50 Proteins product : heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 transcript_id : XM_891442.2

name	5133401N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205441 GeneID:75731 MGI:1922981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5133401N09 gene transcript_id : NM_198004.2

name	5133401N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205445 GeneID:75731 MGI:1922981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5133401N09 gene transcript_id : NM_001048060.1

name	Ubqln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22726198 GeneID:56085 MGI:1860276
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquilin 1 transcript_id : NM_026842.3

name	Ubqln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22726190 GeneID:56085 MGI:1860276
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquilin 1 transcript_id : NM_152234.1

name	Gkap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383921 GeneID:56278 MGI:1891694
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G kinase anchoring protein 1 transcript_id : NM_019832.3

name	Kif27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32401468 GeneID:75050 MGI:1922300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 27 transcript_id : NM_175214.3

name	Hnrpk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350515 GeneID:15387 MGI:99894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein K transcript_id : NM_025279.2

name	Rmi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541983 GeneID:74386 MGI:1921636
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) transcript_id : NM_028904.2

name	Slc28a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598782 GeneID:114304 MGI:2137361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 transcript_id : NM_022317.3

name	LOC100041510 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264264 GeneID:100041510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : similar to ribonuclease T2 transcript_id : XM_001476937.1

name	Smad5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678774 CCDS:CCDS26565.1 GeneID:17129 MGI:1328787
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030509 - BMP signaling pathway [Evidence TAS] [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] [Evidence IDA] codon_start : 1 note : Smad 5 product : MAD homolog 5 protein_id : NP_032567.1

name	EG627415 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950827 GeneID:627415 MGI:3648142
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897164.1

name	Trpc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755889 CCDS:CCDS26566.1 GeneID:26946 MGI:1349470
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transient receptor protein 8; mouse transient receptor potential protein homologue TRP7 product : transient receptor potential cation channel, subfamily C, member 7 protein_id : NP_036165.1

name	Spock1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50053938 GeneID:20745 MGI:105371
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : sparc/osteonectin, cwcv and kazal-like domains proteoglycan product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 protein_id : NP_033288.2

name	Klhl3 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264251 GeneID:627648
definition	codon_start : 1 product : similar to Kelch-like protein 3 protein_id : XP_354754.6

name	Hnrpa0 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950644 GeneID:77134 MGI:1924384
definition	codon_start : 1 product : heterogeneous nuclear ribonucleoprotein A0 isoform 2 protein_id : XP_896535.1

name	5133401N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205442 GeneID:75731 MGI:1922981
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : gluconokinase-like protein isoform a protein_id : NP_932121.2

name	5133401N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205446 GeneID:75731 MGI:1922981
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : gluconokinase-like protein isoform b protein_id : NP_001041525.1

name	Ubqln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22726191 CCDS:CCDS26569.1 GeneID:56085 MGI:1860276
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0019215 - intermediate filament binding [Evidence NAS]; GO:0019900 - kinase binding [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence NAS] GO_process : GO:0008632 - apoptotic program [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0031396 - regulation of protein ubiquitination [Evidence ISS]; GO:0001666 - response to hypoxia [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ubiquilin 1 isoform 2 protein_id : NP_689420.1

name	Ubqln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22726199 GeneID:56085 MGI:1860276
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0019215 - intermediate filament binding [Evidence NAS]; GO:0019900 - kinase binding [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence NAS] GO_process : GO:0008632 - apoptotic program [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0031396 - regulation of protein ubiquitination [Evidence ISS]; GO:0001666 - response to hypoxia [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ubiquilin 1 isoform 1 protein_id : NP_081118.3

name	Gkap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789999 GeneID:56278 MGI:1891694
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007199 - G-protein signaling, coupled to cGMP nucleotide second messenger [Evidence TAS] codon_start : 1 note : 42 kD cGMP-dependent protein kinase anchoring protein product : G kinase anchoring protein 1 protein_id : NP_062806.1

name	Kif27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32401469 CCDS:CCDS26570.1 GeneID:75050 MGI:1922300
definition	GO_component : GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : kinesin-related protein KIF27 protein_id : NP_780423.2

name	Hnrpk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384620 GeneID:15387 MGI:99894
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : heterogeneous nuclear ribonucleoprotein K protein_id : NP_079555.1

name	Rmi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541984 CCDS:CCDS26571.1 GeneID:74386 MGI:1921636
definition	codon_start : 1 exception : mismatches in translation product : RMI1, RecQ mediated genome instability 1, homolog protein_id : NP_083180.2

name	Slc28a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91598783 CCDS:CCDS26572.1 GeneID:114304 MGI:2137361
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0001882 - nucleoside binding [Evidence IEA]; GO:0015390 - purine-specific nucleoside:sodium symporter activity [Evidence IDA]; GO:0015389 - pyrimidine- and adenine-specific:sodium symporter activity [Evidence IDA] GO_process : GO:0015860 - purine nucleoside transport [Evidence IDA]; GO:0015864 - pyrimidine nucleoside transport [Evidence IDA] codon_start : 1 note : concentrative Na+-nucleoside cotransporter product : solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 protein_id : NP_071712.3

name	LOC100041510 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264265 GeneID:100041510
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476987.1

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 2 pseudo : _no_value

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 1 pseudo : _no_value

name	LOC100041086 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041086
definition	number : 1 pseudo : _no_value

name	LOC100041086 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041086
definition	number : 2 pseudo : _no_value

name	LOC100041086 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041086
definition	number : 3 pseudo : _no_value

name	LOC100041086 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041086
definition	number : 4 pseudo : _no_value

name	LOC100041086 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041086
definition	number : 5 pseudo : _no_value

name	LOC435361 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435361
definition	number : 1 pseudo : _no_value

name	LOC671252 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264262 GeneID:671252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 ESTs, 2 Proteins product : similar to Ac2-210 pseudo : _no_value transcript_id : XR_032911.1

clone name	MSMg01-273O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356G22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-105N05.T7 (MSMg01no105_n05.b1)	MSMg01-105N05.TJ (MSMg01no105_n05.g1)
ACC	AG320078	AG320079
length	722	716
length of high quality (start - end)	126 (197 - 322)	159 (74 - 232)
definition	CHROMAT_FILE: MSMg01no105_n05.b1 PHD_FILE: MSMg01no105_n05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:05:35 2005	CHROMAT_FILE: MSMg01no105_n05.g1 PHD_FILE: MSMg01no105_n05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:05:35 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(57,889,166 - 57,889,291)	(57,768,375 - 57,768,533)
sequence	CCTGAAACTATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXCGCGGAATTCCAGGGTTTTCTGACTCCTGTTCGGTTGTTCATCCT CTTCCAATTAAGCTGTAAACCTTTTATCAGCACGTGCCACCTATTTTCTC TCCTCTTGGGTCACTATCCTCTGGGGCTGGCTGCCTTAGAAGGATGTAGA AATACCCAGTAACATAATTTCTCCAAACCTCAGCTTCATTTTCTCTCACA CGCTTTTTGCTGACTGTGGCAGCTTCTTCCTCTTTCTGCACGTTGCCTGT TTAGAATGCTCAGGCTTAAGGGGGTCTGATAGTTTGGGATCCTGCCATCC TGTGGCTCCTGCCGTTTGTGCCAGTCGAGGCCTGGTAATACACAGTGTTG CACTGCGGTTACGCGGGGAGGTAGAGTGTTTGTTCACTCAGTGGCCATCT GTCCGTGGTGGGAAAGTGGCACCCTCCCCTCTGTTGGCCTTTGCGACTGC CGTGTAGTGCTATAAGTCCGGTGATTCTAATCTTTCTGCCTCAACTCGTG TTCCTCGGTGTTCCCATATAAAAATCACGCGCTCCGCCCTCCACGCCCTT TTCTACTTACACCCTAATACGTGCTTGCTCCCCTCTAATGTGATACCTTA TCCTGTTGATTCGCCCGCTTTCCCCTCTGTTCCCCTTCTCATCTTTTCCT ACCTCTTGCCTCCCCCGCCCCA	TTCCGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXAGGTTGCAGTGGGGAAGAAAAGGATGT CATTTGCAGACTCCTGTGCACACAGGCACTGCCTGGAGGGCTCCTCCGAG CTCAGACTGTGGGGTCTCCCTGCATTTTCCACTGCAGTACAACAGGGTGA AGCTTGAGAACAGACTCTGAGGAGATGTCTCAGCAGATGGCCAGAGGGCT ACAGGTGGATGTCACTGCTTCAGGAAATACTTTTCATGTTTCCCAGGACT TCCCATAAAAACTTATATTTACTTACCAATGGCGCCACGGTGATCACACA CATTATGTGTGCTTGAAGAGACCTAAGCTCCAATTGCGACCCCTACCCCT GCTATCTATGTGGCCTCACAACCCACTTATTTCCCCCAACCCATTTTTAC CTTCCATACTTGAGCTAGAAATTATTTATTCTTCTACGATGCGTCTCGGC CACTCCCAATATTTTTTATATGTGTAGGCTCCCTATTATCCATCAACCTC CTTCTTCTTTTTTCCTTCGTCCCTCTTTTCACCTCTTCCGCTGTTCTCTT ATCCCTCTCTCCTTTCCCCCCCATTAACACCCACACTTCGTCTTCCTCTT CCTCCCTCTGTCCTTTTTCCTTCGCCTTCCTCCCCTTTTCCTTTCTACCC CCTCTTCTTGTTTTAG
quality values	Open. Hide. 9 9 9 10 10 21 8 8 6 6 6 8 8 8 8 10 9 10 19 23 20 16 15 12 12 21 32 33 33 33 33 33 43 43 40 31 31 30 29 19 12 10 9 10 9 9 9 11 15 15 12 12 16 13 14 19 24 34 32 22 21 18 28 28 23 25 25 22 15 12 9 9 9 11 9 9 9 10 10 12 18 24 25 24 37 37 32 31 21 21 19 20 16 22 33 31 37 34 48 48 57 48 37 36 36 36 42 37 57 57 48 42 42 43 42 42 36 39 35 37 37 43 47 42 41 33 19 19 11 17 12 15 12 12 12 22 24 37 37 37 37 48 48 48 57 57 50 50 37 37 28 28 25 40 40 40 42 34 24 11 11 12 25 30 48 48 47 47 48 48 47 37 37 30 30 28 28 36 44 43 48 36 44 32 37 23 27 16 16 11 18 18 18 21 11 11 11 24 24 37 44 44 47 44 57 44 42 42 47 44 44 43 43 43 57 57 57 57 57 57 57 47 47 47 47 50 57 47 52 43 43 42 42 32 43 43 37 37 43 50 50 59 59 57 57 57 57 57 57 57 57 32 32 14 14 14 32 32 43 32 32 22 18 15 26 24 35 32 28 28 30 42 42 44 44 47 57 44 47 43 47 43 48 48 48 28 34 13 13 12 23 23 25 26 28 41 41 43 43 43 33 37 30 30 30 37 37 37 37 24 26 13 13 13 28 29 39 37 25 25 17 19 19 15 12 15 17 15 13 6 6 8 8 8 10 18 18 11 11 11 22 21 28 18 18 23 21 21 28 25 25 17 14 14 15 18 18 25 26 37 27 19 12 18 18 14 18 15 13 12 16 12 13 13 13 13 14 15 15 13 18 15 22 16 10 10 10 13 13 16 19 19 15 14 14 13 13 19 22 11 11 11 21 17 10 8 8 8 8 8 8 6 6 8 8 16 13 18 21 21 14 14 14 13 10 13 10 10 10 13 18 15 15 15 15 15 11 10 8 10 11 8 8 11 15 12 11 11 12 15 10 8 8 8 8 10 9 13 12 12 11 11 11 16 12 12 11 11 11 11 11 12 16 18 20 31 31 33 20 19 12 10 10 10 11 17 12 12 9 9 9 8 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 8 10 10 8 10 8 8 8 8 11 11 11 11 12 8 8 6 6 8 8 10 9 9 8 8 8 8 8 8 8 8 13 19 12 8 8 8 8 8 8 15 15 12 11 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 8 8 8 8 8 8 6 9 10 10 10 11 8 8 8 8 8 10 11 10 9 8 8 8 12 12 16 15 12 10 10 10 10 10 11 11 8 8 8 8 8 8 9 9 8 8 6 6 6 6 8 6 6 8 6 6 8 8 10 11 11 15 12 10 10 10 8 8 6 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 9 10 13 8 8 8 8 8 10 10 10 11 10 10 9 9 8 8 8 13 10 11 12 12 13 9 9 9 11 11 12 10 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 10 17 20 14 18 13 14 17 17 26 21 19	Open. Hide. 8 8 6 6 8 8 10 10 9 9 8 10 15 23 23 17 12 12 15 18 20 30 11 11 9 9 9 19 27 19 10 10 12 10 6 6 6 6 8 8 8 8 8 8 8 19 19 30 33 33 36 33 33 29 29 19 16 8 8 8 8 8 8 11 17 21 21 18 18 28 29 24 24 30 30 32 33 47 42 42 42 33 33 28 28 25 28 30 39 39 43 39 39 39 36 33 30 30 29 29 36 43 43 46 46 42 42 32 32 32 37 39 43 39 36 32 18 18 20 20 20 30 24 28 24 24 30 30 42 44 42 30 33 42 42 36 36 32 23 23 28 36 42 44 48 48 48 44 50 43 50 32 32 19 24 24 32 32 36 43 44 52 43 43 38 38 50 50 57 57 57 57 57 52 52 57 52 52 52 52 52 57 50 44 35 32 24 19 9 9 9 9 10 11 24 19 24 22 28 32 43 43 29 28 27 28 18 19 19 30 30 32 35 37 42 42 43 36 36 26 26 20 24 20 22 28 28 28 28 19 18 11 12 12 22 24 24 24 16 11 12 15 15 15 20 30 27 24 24 19 29 17 20 20 32 28 18 18 9 11 9 12 12 24 25 47 47 35 32 32 25 28 24 25 21 21 22 31 31 29 30 30 30 34 33 19 18 9 9 9 12 12 13 21 26 28 30 30 37 37 39 35 28 28 15 15 12 12 12 19 24 15 25 19 19 13 13 13 28 18 20 16 13 12 11 11 10 12 11 8 8 8 8 8 8 8 11 10 15 12 12 12 15 12 12 8 8 8 10 10 10 10 10 8 8 8 8 10 8 8 8 8 8 8 8 12 12 11 12 15 19 22 19 21 12 12 12 12 12 12 12 14 17 16 18 11 10 11 11 11 10 12 8 8 8 10 15 28 28 23 18 14 15 13 15 15 17 16 11 13 13 15 15 21 24 12 12 12 12 11 12 10 10 10 10 10 10 12 9 9 9 9 12 9 11 9 9 9 9 9 11 12 12 16 21 21 14 14 14 14 14 17 14 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 10 9 9 9 9 9 10 11 12 10 10 9 9 15 9 8 8 8 10 9 9 8 8 6 6 8 10 10 10 8 8 8 10 9 11 15 16 13 11 8 8 6 6 8 6 8 9 10 11 10 10 10 10 13 16 11 11 11 8 8 8 8 8 8 11 9 9 9 9 9 9 10 10 10 10 10 11 9 8 10 8 8 8 8 8 8 8 8 10 13 11 9 9 9 12 12 13 8 8 6 6 8 10 11 10 10 10 10 22 10 10 10 8 8 8 8 8 11 15 12 10 10 8 8 8 8 8 8 8 9 9 11 15 17 16 9 9 9 9 10 9 8 8 8 8 8 10 13 18 19 18 10 10 8 8 8 8 8 8 8 8 8 8 10 10 13 9 9 9 10 10 11 11 11 11 11 10 9 12 11 13 8 8 8 10 8 10 10 10 9 9 9 9 10 16 14 12 15 10 10 9 8 10 8 8 8 8 8 10 8 12 7 9 9 8 12 12 15 10 11 13 11 16 11 11 9 10 12 12 10 10 8 8 8 8 8 6 7 8 8 10 8 8 8 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no105_n05.b1 MSMg01no105_n05.b1 CHROMAT_FILE:
MSMg01no105_n05.b1 PHD_FILE: MSMg01no105_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:35 2005
         (126 letters)



>mm_chr13_57888966_57889491
          Length = 526

 Score =  236 bits (122), Expect = 4e-67
 Identities = 125/126 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagaaatacccagtaacataatttctccaaacctcagcttcattttctctcacacgcttt 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 326 tagaaatacccagtaacataatttctccaaacctcagcttcattttttctcacacgcttt 267

                                                                       
Query: 61  ttgctgactgtggcagcttcttcctctttctgcacgttgcctgtttagaatgctcaggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttgctgactgtggcagcttcttcctctttctgcacgttgcctgtttagaatgctcaggct 207

                 
Query: 121 taaggg 126
           ||||||
Sbjct: 206 taaggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space:    61124
Effective search space used:    61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no105_n05.g1 MSMg01no105_n05.g1 CHROMAT_FILE:
MSMg01no105_n05.g1 PHD_FILE: MSMg01no105_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:35 2005
         (159 letters)



>mm_chr13_57768175_57768733
          Length = 559

 Score =  261 bits (135), Expect = 1e-74
 Identities = 153/159 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggttgcagtggggaagaaaaggatgtcatttgcagactcctgtgcacacaggcactgcc 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggttgcagtggggaagaaacggatgtcatttgcagactcctgtgcacacaggcactgcc 260

                                                                       
Query: 61  tggagggctcctccgagctcagactgtggggtctccctgcattttccactgcagtacaac 120
           ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 261 tggagggctcctcggagttcagactgtggggtctccctgcattttccactgcagtagaag 320

                                                  
Query: 121 agggtgaagcttgagaacagactctgaggagatgtctca 159
           ||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 agggtgaagcttgagaacagactctgaggagatatctca 359


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space:    83201
Effective search space used:    83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information