Query= MSMg01no106_d09.b1 MSMg01no106_d09.b1 CHROMAT_FILE:
MSMg01no106_d09.b1 PHD_FILE: MSMg01no106_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:19 2005
(663 letters)
>mm_chr13_114678389_114679451
Length = 1063
Score = 1166 bits (603), Expect = 0.0
Identities = 648/663 (97%)
Strand = Plus / Plus
Query: 1 ttttcaggaaaaagatgtgaagtcttgggtggctgcgccattcgttgtctggctccctga 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ttttcaggaaaaagatgtgaagtcttgggtggctgggccattcgttgtctggctccctga 260
Query: 61 agctggagagaggacctaaaatccaatcccgtcttagaagagctttgagctagtctgctt 120
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 agctggagagaggacctgaaatccaatcccgtcttagaagagctttgagttagtctgctt 320
Query: 121 tcggcagtatgctgtcctgcacctggggtgctgtcccttcctgtgggggccatttgttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcggcagtatgctgtcctgcacctggggtgctgtcccttcctgtgggggccatttgttca 380
Query: 181 tttctctactctgcttgtttaggtttagtgtcaggcgtgcagaggatcagctacagtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tttctctactctgcttgtttaggtttagtgtcaggcgtgcagaggatcaactacagtctt 440
Query: 241 gcatgttcctgggaacaggagctgtctttgatgtctaaagcctctgcaacaatttagaag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcatgttcctgggaacaggagctgtctttgatgtctaaagcctctgcaacaatttagaaa 500
Query: 301 ttattttaaaattttatttgggtgcagtttcaggagcaagtattcatcttgtcccttgaa 360
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
Sbjct: 501 ttattttaaaattttatttgggtgcagtttcaggagcaagtattcatcctgccccttgga 560
Query: 361 ttagaaatccgttccttcttttcctccgtgacagtcttccggcccaaaggatggctacta 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagaagtccgttccttcttttcctccgtgacagtcttccggcccaaaggatggctacta 620
Query: 421 cgtctgtacggcatgagggcttccgcagagcagtggtcctgagcgacagtctgtgccttt 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 cgtctgtacggcatgagggcttccgcagagcagcggtcctgagcgacagtctgtgccttt 680
Query: 481 tgtgtctctagggaggggtagcattgcaggtcccagcgtctgctgcagagaggcttaatg 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgtctctagggaggggtagcgttgcaggtcccagcgtctgctgcagagaggcttaatg 740
Query: 541 agcagatgcagagtctccttcttctcgtgcatgtacagggagctgtacccttgcagtcag 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 741 agcagatgcagagtctccttcttctcgtgcatgtacagggagcagtacccttgcagtcag 800
Query: 601 aaggagctgggcgcgctagacgtgggtcacgcgctctcctctcctctcagtggctttgga 660
|||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 801 gaggagctgggcgcgctagacgtgggtcacgagctctcccctcctctcagtggctttgga 860
Query: 661 acc 663
|||
Sbjct: 861 acc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_d09.g1 MSMg01no106_d09.g1 CHROMAT_FILE:
MSMg01no106_d09.g1 PHD_FILE: MSMg01no106_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:19 2005
(620 letters)
>mm_chr13_114767530_114768553
Length = 1024
Score = 961 bits (497), Expect = 0.0
Identities = 524/535 (97%), Gaps = 4/535 (0%)
Strand = Plus / Minus
Query: 89 aaaacatgaggctggagagatggctcagtggataagaaagggcatttgctgctctatcta 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 aaaacatgaggctggagagatggctcagtggataagaaagggcatttgctgctctatcta 965
Query: 149 ccataaggcatgaatttagttccagcacccacttggtggtggtgaatccagcgccttctg 208
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 964 ccataaggcatgaatttagttccagcacccacttggtggtggggaatccagcgccttctg 905
Query: 209 ctggccgatgtgggcagcaggcaaatgcacagtgcatataatacatgcaggaaaccactc 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ctggccgatgtgggcagcaggcaaatgcacagtgcatataatacatgcaggaaaccactc 845
Query: 269 ctacacacgaagtaaaaataataaatcgtaaaaaaacacaaccgaacaaaaacattatct 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ctacacacgaagtaaaaataataaatcgtaaaaaaacacaaccgaacaaaaacattatct 785
Query: 329 caataataagccattgctcaggcaaccctgacacctcacgcttcaccagaaagcctgttt 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 caataataagccattgctcaggcaaccctgacacctcacgcttcaccagaaagcctgttt 725
Query: 389 tctcccctttaattaaaaaactggccttaattgatgtaaaagtcattgaaaaagccagag 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tctcccctttaattaaaaaactggccttaattgatgtaaaagtcattgaaaaagccagag 665
Query: 449 tcaccaagtt----aaaaaaaaaaatcaatcaaaagataataagatatccgagcctaaga 504
|||||||||| ||||||||||| ||||||||||||| |||||||||||| |||||||
Sbjct: 664 tcaccaagttaaaaaaaaaaaaaaaccaatcaaaagatagtaagatatccgaacctaaga 605
Query: 505 ttaactaaaacaaaaatatcagtataaaagtacggtaacacgtcatctgcctttattggc 564
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 604 ttaactaaaacaaaaatatcagtataaaagtatggtaacatgtcatctgcctttattggc 545
Query: 565 ccaaatatgtaacacacatttacattgatctacgtctggtttcccacttaaataa 619
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 544 ccaaatatgtaacacacatttacattgatctacttctggtttcccacttaaataa 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1024
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1014
Effective search space: 618540
Effective search space used: 618540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
