CCCTTTCTATNNNTATCATTGCGCGCTAXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCATGGATACCAAAGATCCTCTTCAAATAGAGAAAGACAG
TCTTACTGGGCTAACTCTCCCTTAGATAAATAAATGATCAGAACTTGGCT
GGAGAGGTGGCTCCATGGGTAAAATATTTGTGGCATAAGTTTGCAGAGCC
AAATTCAACCCATGTGAAAACCAGGCATGGTAGTATGTTCTTAGAATCTC
AGTGTCCATGTAGCAAATTTGGAGGCTGAGACACAAAAGTCCCAAAGTCT
TGTGGGCCAGCAACCCTGGCGCTCAAAGTGGCGAACAGAGAAGGTCTGTC
TCAATCAAGTTGAAAGGCAGGGACCAGCACTCAGGATTGTCATCTGACCA
TCTCACATGCACTGTTACATGCATAGGTTCATACACATGCATGTTAGCAA
GCACATATTGTACACACAACGAATAAAAAATCAGAACTTACTGTTGTCAT
CGTACCTTTGTAGTAGCCCTCATTCTGACTTTTCTTATAACCATGCAGTA
ATATCCCCAGGCTTTCCTTCTTTGAGACCCAACTTTACTATGTAGTCCAA
CCTGGGCTTCAACTTGTAGCAATCTTTCTGCTTAGGCATCTTGAGTGCTG
AGATTATAGACAAGTACCGCTAGACCAAACCTTGGAACATAATTTTGACT
AGGGAAATAAAAATCTAATAATTTTGATAACGTTTTTGTGGACAGGAACA
GACATTCACCATCAATCTATTAGTCATCCATTCTTGTTATACTTATCACG
TCCTTAATGACTAGGTATTATATGCTGAGTATTGTTTTAAGTTTTGTGCT
TAAGATTCCTGGGTGTACTTTTTGTAAAAATCCTATGCATTTGATTTTAA
GCACCTCTCAATGCTTAATTATCTGGAAATCCTGGGTTAATCTGGCCTTA
GTTATCGTTCTTACCTATTCCCAATTCTTTCTACATTGTTTCATATCCCT
TTTGACCTTTTAAGTTACCTAAACCAGAATCATGTTTTGGTGTTATGTTC
CCCGGTGCGGCTTGCCTGGAATATATCTTCTTACAAAAAATCCTGTGTCC
CTTTACATTCTTAATTAAAGAATTCTGGCTCAAAGTTTATCTTTAAAGAA
ATGGTTTTCTCTCTAATTTCCCTATTTAATTGCCCACCCCTTAAAAAATT
TTTTCCCTTTCTGTTTATTTTTCTATTTGACGCTTGTAGTTAGGTTGGTT
GCTCTTTCATAATTATA

NCCATTTCTTATTTCAACATGTGATGCTGGGGCGCCXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCCTTTTGAGGAAGTTTATTACTG
CTCTTTTATGTTCCGTGCCCTATTAACAAGTAATTCTCACTGGAGAAGAT
ATCTATAGGACTGACAGTTTGGGTTGACAAGTATATTTTTTGGCCTTTCT
TATTCCTTGATTTTTTGTGATTAGACCTGGGACATGTGGACTTCTTTTGC
CAGTTGTGTGTTTGGTGTGGACACAAAAAGCTATGTTAACCTAGCCTAAA
CCTGGAGGTTTGGCATTATGCAGGTTGTGTGTGCCAGTCAGGGATAGTGT
CTTGGTTGTGAGACCTAGACTAGTTCTAATGTTTGGGTAAGGTTCAAGTG
GAGTAGGTTATGGCAAAAAAGACTTCCCAGGATTCATCAGAGCACAGGAT
ACTTGCATCAGGCTGGGCCTAGAGGTTGGATATGGTGTAGAAAAAAAAGT
TCAGGTGAACAATTAAGATTTTTAAATTATGTTTGCTGACTTGTTTAACG
ACAGGATGAAAGCTACTAATCAAAATGTTGGACACAAAATTATGTAAGAA
ACATAATCTTAACATTAAGGAGGAAATCTAAAGGAACTATATTTTTTGCA
TAGTTATTTAGACATGCAACTCTTCTAGATTAGGAAACATTCTCTTTCTG
TTTCAAACACAAATTAGTCCACTTTTATGACATATGTATCCAGAATTAGA
AAAAAAAGGTGAATCCTCTGAAAAAGTTTATTACTGTTCTTTGTTCTCGA
AAAAAAAACTTTTATTATCACTGTTTTTTGGGTACCATCTTGTAATAAAA
TTGTTTCTTATTTTAATCAGTTTATGCTACTGATAATATTTTTCCTTATA
AATAAATACATAATTTTTATGGAATATTCTTTTCCTTGTTTAAAATTAAG
GCCATTATTTGTAAAAGGTCGGTGCTTGGCAACCCCCCTAAGTTAAAGTT
CTTTCCTTTTTAAATGGTCTTTATGGGAAGGGTTTTCTCCTCTGCATATA
TATCGAATTCTTGGGATACACTTTTAAAATTTTTTATACTCTATTAAAGG
ATATGTGGTAAATCTGACATCTTGTGTTTTAAATCTTTTTCCAAGGAAAT
TTCTTGCTCTTTTTTATAACAAAGGTAATTCTTCCTCATGGTCTCCTTAA
TTTAATCTTTTTACTCGTAACCGCGTGTTGTCTTCTATCTTTTTTAAAAG
CACTTCTCTCCTCTCT

Query= MSMg01no106_f15.b1 MSMg01no106_f15.b1 CHROMAT_FILE:
MSMg01no106_f15.b1 PHD_FILE: MSMg01no106_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:39 2005
         (626 letters)



>mm_chr13_17266695_17267720
          Length = 1026

 Score = 1164 bits (602), Expect = 0.0
 Identities = 620/626 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaataaatgatcagaacttggctggagaggtggctccatgggtaaaatatttgtggcata 60
           |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aaatgaatgaacagaacttggctggagaggtggctccatgggtaaaatatttgtggcata 864

                                                                       
Query: 61  agtttgcagagccaaattcaacccatgtgaaaaccaggcatggtagtatgttcttagaat 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 863 agtttgcagagccaaattcaacccatgtgaaaaccagggatggtagtatgttcttagaat 804

                                                                       
Query: 121 ctcagtgtccatgtagcaaatttggaggctgagacacaaaagtcccaaagtcttgtgggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctcagtgtccatgtagcaaatttggaggctgagacacaaaagtcccaaagtcttgtgggc 744

                                                                       
Query: 181 cagcaaccctggcgctcaaagtggcgaacagagaaggtctgtctcaatcaagttgaaagg 240
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cagcaaccctggcgttcagagtggcgaacagagaaggtctgtctcaatcaagttgaaagg 684

                                                                       
Query: 241 cagggaccagcactcaggattgtcatctgaccatctcacatgcactgttacatgcatagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 683 cagggaccagcactcaggattgtcatctgaccatctcacatgcactggtacatgcatagg 624

                                                                       
Query: 301 ttcatacacatgcatgttagcaagcacatattgtacacacaacgaataaaaaatcagaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttcatacacatgcatgttagcaagcacatattgtacacacaacgaataaaaaatcagaac 564

                                                                       
Query: 361 ttactgttgtcatcgtacctttgtagtagccctcattctgacttttcttataaccatgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttactgttgtcatcgtacctttgtagtagccctcattctgacttttcttataaccatgca 504

                                                                       
Query: 421 gtaatatccccaggctttccttctttgagacccaactttactatgtagtccaacctgggc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtaatatccccaggctttccttctttgagacccaactttactatgtagtccaacctgggc 444

                                                                       
Query: 481 ttcaacttgtagcaatctttctgcttaggcatcttgagtgctgagattatagacaagtac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcaacttgtagcaatctttctgcttaggcatcttgagtgctgagattatagacaagtac 384

                                                                       
Query: 541 cgctagaccaaaccttggaacataattttgactagggaaataaaaatctaataattttga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cgctagaccaaaccttggaacataattttgactagggaaataaaaatctaataattttga 324

                                     
Query: 601 taacgtttttgtggacaggaacagac 626
           ||||||||||||||||||||||||||
Sbjct: 323 taacgtttttgtggacaggaacagac 298


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no106_f15.g1 MSMg01no106_f15.g1 CHROMAT_FILE:
MSMg01no106_f15.g1 PHD_FILE: MSMg01no106_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:39 2005
         (330 letters)



>mm_chr13_17101519_17102248
          Length = 730

 Score =  592 bits (306), Expect = e-173
 Identities = 324/330 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   taattctcactggagaagatatctataggactgacagtttgggttgacaagtatattttt 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taattctcactggagaagataactataggactgacagtttgggttgacaagtatattttt 260

                                                                       
Query: 61  tggcctttcttattccttgattttttgtgattagacctgggacatgtggacttcttttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcctttcttattccttgattttttgtgattagacctgggacatgtggacttcttttgc 320

                                                                       
Query: 121 cagttgtgtgtttggtgtggacacaaaaagctatgttaacctagcctaaacctggaggtt 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 cagttgtgtgtttggtgtggacacaaaaggctatgttaacctagcctaaacctggaggtt 380

                                                                       
Query: 181 tggcattatgcaggttgtgtgtgccagtcagggatagtgtcttggttgtgagacctagac 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcattatgcaggttgtgtatgccagtcagggatagtgtcttggttgtgagacctagac 440

                                                                       
Query: 241 tagttctaatgtttgggtaaggttcaagtggagtaggttatggcaaaaaagacttcccag 300
           |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 441 tagttccaatgtttgggtaaggttcaagtggagtaggttaaggcaaaaaagactttccag 500

                                         
Query: 301 gattcatcagagcacaggatacttgcatca 330
           ||||||||||||||||||||||||||||||
Sbjct: 501 gattcatcagagcacaggatacttgcatca 530


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space:   231441
Effective search space used:   231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)