Query= MSMg01no112_m03.b1 MSMg01no112_m03.b1 CHROMAT_FILE:
MSMg01no112_m03.b1 PHD_FILE: MSMg01no112_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:01 2005
(330 letters)
>mm_chr13_52520844_52521573
Length = 730
Score = 580 bits (300), Expect = e-170
Identities = 323/332 (97%), Gaps = 4/332 (1%)
Strand = Plus / Plus
Query: 1 ccaagtctccaggccagaggttaagtggtgtctcttagtctgtgtcaatatgactttggc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ccaagtctccaggccagaggttaagtggtgtctcttggtctgtgtcaatatgactttggc 260
Query: 61 tcttgtacgaagaatgaaggtgatccaagacgaagaaaactaagaaacttcaagtttatt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 tcttgtacgaagaatgaaggtgatccaacacgaagaaaactaagaaacttcaagtttatt 320
Query: 121 agtcagagttgtcactagagcttct--tccaggcaaggtcagaacagcttctggcctcct 178
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 321 agtcagagttgtcactagagcttctgat--aggcaaggtcagaacagcttctggcctcct 378
Query: 179 tcttacctgaaatagtctcttctgaggttctaaggaggctctgtcccttgtgttgctgaa 238
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 379 tcttaccagaaatagtctcttctgaggctctaaggaggctctgtcccttgtgttgctgaa 438
Query: 239 ctttggaaatcgtgggttaccatggagtccactgacacttctcatcttgcgatatcacta 298
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 439 ctttggaaatcgtgggttaccatggagtccactgacacttctcatcttgtgatatcacta 498
Query: 299 ctttcatttcttactcctttctctgtgtgtct 330
||||||||||||||||||||||||||||||||
Sbjct: 499 ctttcatttcttactcctttctctgtgtgtct 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_m03.g1 MSMg01no112_m03.g1 CHROMAT_FILE:
MSMg01no112_m03.g1 PHD_FILE: MSMg01no112_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:01 2005
(291 letters)
>mm_chr13_52667238_52667928
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Minus
Query: 1 tctggtcccgtctgtgaagtggggactgttactgtgtcggtcccagaggaggaggagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tctggtcccgtctgtgaagtggggactgttactgtgtcggtcccagaggaggaggagctg 577
Query: 61 atggagacattctctgccctgaggctcacagacaggaagtcatagaatcatgattcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atggagacattctctgccctgaggctcacagacaggaagtcatagaatcatgattcaaac 517
Query: 121 ccagatcttcaggtttctagagccccagaggtcaggtcattctagtatccctgagggtgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccagatcttcaggtttctagagccccagaggtcaggtcattctagtatccctgagggtgt 457
Query: 181 agaaacatgggacaacagtcctgtgaaaagctttggggcacatgcagatgtatttttaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agaaacatgggacaacagtcctgtgaaaagctttggggcacatgcagatgtatttttaga 397
Query: 241 ctaacagtgtaccagcttaacacataattagattgtcactgccacctcaga 291
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 396 ctaacagtgtaccagcttaacacataattagattgtcactgtcacctcaga 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
