Query= MSMg01no114_i21.b1 MSMg01no114_i21.b1 CHROMAT_FILE:
MSMg01no114_i21.b1 PHD_FILE: MSMg01no114_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:16 2005
(129 letters)
>mm_chr13_47095816_47096344
Length = 529
Score = 226 bits (117), Expect = 3e-64
Identities = 126/129 (97%)
Strand = Plus / Minus
Query: 1 aaatggtaggccaggaaagacccccctctctccaagcttggaggcccaaaagaactcttc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaatggtagtccaggaaagacccccctctctccaagcttggaggcccaaaagaactcttc 270
Query: 61 taattcatcttcttgtcacttaagaggagcaggaatagcatagtgtgcgtatgtgtatgc 120
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 269 taattcatcttcttgtcacttaagaggagcaggaatagtagagtgtgcgtatgtgtatgc 210
Query: 121 attataaga 129
|||||||||
Sbjct: 209 attataaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no114_i21.g1 MSMg01no114_i21.g1 CHROMAT_FILE:
MSMg01no114_i21.g1 PHD_FILE: MSMg01no114_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:16 2005
(478 letters)
>mm_chr13_46976371_46977247
Length = 877
Score = 878 bits (454), Expect = 0.0
Identities = 472/478 (98%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 1 tttctacacaagtcaggaacaaccacaggaggaaaatgagcatttccagagaccatgcag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tttctacacaagtcaggaacaaccacaggaggaaaatgagtatttccagagaccatgcag 260
Query: 61 ctcaggacctggggacatcactttgccagccacatcaggcgtcaccagcaaaggccacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaggacctggggacatcactttgccagccacatcaggcgtcaccagcaaaggccacag 320
Query: 121 aaaccagggtgagttacacgacatcatccaaagtcgttttcaggaccaagaagggaggag 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaccaggatgagttacacgacatcatccaaagtcgttttcaggaccaagaagggaggag 380
Query: 181 gaaacccagaatttattttgttctactacatcttacatatcagaagcagactacagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaacccagaatttattttgttctactacatcttacatatcagaagcagactacagagga 440
Query: 241 agatcggtctccatatgaacacctcttctttgctgtctgcatcatgatgcccatgacgct 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatcggtctccatatgaatacctcttctttgctgtctgcatcatgatgcccatgacgct 500
Query: 301 gtaataacagaacatcagtggcaagaggtctcctccagctctcacgaaggccatgtgcct 360
|||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 501 gtaataacagaacatcaggggcaagaggtctcctccagctctcaggaaggcc-tgtgcct 559
Query: 361 caactgacatcgtaaaacagccatccagaaaataatcaagtttaatatgacagtggcggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caactgacatcgtaaaacagccatccagaaaataatcaagtttaatatgacagtggcggt 619
Query: 421 catgactttgatcctagcacttagaaggcagaggtagatggatttctgagtctgaggc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catgactttgatcctagcacttagaaggcagaggtagatggatttctgagtctgaggc 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
