Query= MSMg01no115_o21.b1 MSMg01no115_o21.b1 CHROMAT_FILE:
MSMg01no115_o21.b1 PHD_FILE: MSMg01no115_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:00 2005
(591 letters)
>mm_chr13_59970187_59971178
Length = 992
Score = 1075 bits (556), Expect = 0.0
Identities = 580/588 (98%), Gaps = 1/588 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtttccagcatccacatgaagattgacaaccaccttctagctccagggcatcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 gaattcagtttccagcatccacatgaagattgacaaccaccttctagctccagggcatcc 878
Query: 65 aacgcttgctctggtctccatggccatcgtaggcatgtggtgcacgtgtatacactcaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aacgcttgctctggtctccatggccatcgtaggcatgtggtgcacgtgtatacactcaga 818
Query: 125 cccacacacatacacacaaaacaaacaaatgcatcttataaaaacaaaatgtttgctccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cccacacacatacacacaaaacaaacaaatgcatcttataaaaacaaaatgtttgctccc 758
Query: 185 aattatactg-ttttagggaaatatgttcaaatgaatcattttggctcgcatgaacttct 243
|||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aattgtactgtttttaggaaaatatgttcaaatgaatcattttggctcgcatgaacttct 698
Query: 244 gggaagcctatagttgtgcatagccataagacaaggtgcctaaacaatagctcaaactgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gggaagcctatagttgtgcatagccataagacaaggtgcctaaacaatagctcaaactgc 638
Query: 304 ttcagataatgtgggaatgcagatgcctcagagcacctaaaagggacctgtgtgattacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttcagataatgtgggaatgcagatgcctcagagcacctaaaagggacctgtgtgattacc 578
Query: 364 tcgcccaggtcttcccagaggcacatagaaagaacccaagaatccagaacattccatctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tcgcccaggtcttcccagaggcacatagaaagaacccaagaatccagaacattccatctg 518
Query: 424 tggaggcaaaaccacagaggtatatgcttgcgctttattttcattttaatggtaattttt 483
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 517 tggaggcaaaaccacagagatatatgcttgggctttattttcattttaatggtaattttc 458
Query: 484 ccccagtgtgtcttcagaaacaaaaaccaccctctctaaagaagtgttataaaaatgaag 543
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 457 ccccagtgtgtcttcagaaataaaaaccaccctctctaaaggagtgttataaaaatgaag 398
Query: 544 aaaggtaccattgccagcgtcttcttgtacatagaaactatctatagg 591
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaaggtaccattgccagcgtcttcttgtacatagaaactatctatagg 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space: 570542
Effective search space used: 570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_o21.g1 MSMg01no115_o21.g1 CHROMAT_FILE:
MSMg01no115_o21.g1 PHD_FILE: MSMg01no115_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:00 2005
(547 letters)
>mm_chr13_59873700_59874646
Length = 947
Score = 1042 bits (539), Expect = 0.0
Identities = 545/547 (99%)
Strand = Plus / Plus
Query: 1 tggccctcatatttttcttttaagttgactttctattaaaatcttcaaatctctggagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggccctcatatttttcttttaagttgactttctattaaaatcttcaaatctctggagat 260
Query: 61 tggtggtatagttagactatattaaaatttttcttttccttattaacaatttcattaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtggtatagttagactatattaaaatttttcttttccttattaacaatttcattaaaa 320
Query: 121 tttaaaaaattacgatgcccctcaactgttacgttgaagcctgatctgtgtcactgtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaaaaaattacgatgcccctcaactgttacgttgaagcctgatctgtgtcactgtgtc 380
Query: 181 ctgtgccatgaacctaatttcccaagtggccacggacacctgagtggcatttccagtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtgccatgaacctaatttcccaagtggccacggacacctgagtggcatttccagtgct 440
Query: 241 gcagttccttccctcatgattcctgctgggtccgcttcactgaggctctcccctgagtca 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gcagttccttccctcatgattcctgctgggtcctcttcactgaggctctcccctgagtca 500
Query: 301 tatatttactggaaaggctacctaggagggaaaacaaaatccaacataaacgaaaagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatatttactggaaaggctacctaggagggaaaacaaaatccaacataaacgaaaagaat 560
Query: 361 ggtgtttgagcaaagtcacacaatacttattgtcagttactgacagacacgtgtcccacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtgtttgagcaaagtcacacaatacttattgtcagttactgacagacacgtgtcccacc 620
Query: 421 acaaagggcactcgtcctgagtcgagcagttaggctaggtataaacaagtgcacagccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaaagggcactcgtcctgagtcgagcagttaggctaggtataaacaagtgcacagccat 680
Query: 481 cagaggcactgggcagtgcttagacactgcttcctcagtgctggtaaggtacagccctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 cagaggcactgggcagtgcttagacactgcttcctcagtgctggtaaggtacagccccga 740
Query: 541 ggctgtt 547
|||||||
Sbjct: 741 ggctgtt 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
