NCCCTACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCCGCATGCCTGGGAACATTTTTCTTGAGAAAAAAAAATG
AAGACTTACTATAAAAAGCAAAAACTGAAAACTTTTAGGGAAAAATATAG
AATAATCTTACAACTTTTGATATTTTAACAATAGCAAATGTTTTTTTCTT
CCCCTGTAACACACACACTCACTCACATGCACACACATATGTACTCCAAA
CTATAAATGTGAAGACTGATAAATATTTATTCCATTAAAAAATTATTAAC
TGAAATGGCTATAACTGAGAAATTTAAACAAAAGCCTCATACTAGAAGAT
ATCTGCCACTCTTTAAAAGATTTATGATTTTAATTTGTGTATGACTGTGT
GTCAGCATGTGCAGGCCTGTGGAGACCAGAAGAGGGTGCCAGATTCCCTG
GAGCTGGAGATAAAGGCACTTGTGGACTTTCCAATGTGAGTGCTACGAAC
CAAACTCATTTTCTCTGCAAGAACAGCAAGTGCTCTTAATCACTAAACAG
TCTCATAAGCCATCTCATATACATCTCATATACATCTCATATAGAGGTAA
CATTTTTACAGAATAACATATATTTTTTAAAAAAAAACTGGCACTTAGCT
TTTCTAAAACATAAAGAATCAAAATATCTAAGTCAATGAAACCAATGAAG
ATCATATTTAAATTATCACGAC

NCCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAATCCTGAGATTCCACCTCACAACAGTCAGAATGGCTAA
GATAAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCAGGAAATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTAACACATTCACAAAGGAACTCACACCATATGTACTTACTGAT
AAGTGGATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATT
TCCTAAACACATGAAACTCAT

Query= MSMg01no116_m10.b1 MSMg01no116_m10.b1 CHROMAT_FILE:
MSMg01no116_m10.b1 PHD_FILE: MSMg01no116_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:07 2005
         (628 letters)



>mm_chr13_18849885_18850915
          Length = 1031

 Score =  942 bits (487), Expect = 0.0
 Identities = 518/529 (97%), Gaps = 3/529 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccgcatgcctgggaacatttttcttgag--aaaaaaaaatgaagacttactat 62
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 529 gaattctccgcatgcctgggaacatttttcttgagaaaaaaaaaaatgaagacttactat 470

                                                                       
Query: 63  aaaaagcaaaaactgaaaacttttagggaaaaatatagaataatcttacaacttttgata 122
           |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 469 aaaaagcaaaaactgaaaacttttaggggaaaatatagaataatcttataacttttgata 410

                                                                       
Query: 123 ttttaacaatagcaaatgtttttttcttcccctgtaacacacacactcactcacatgcac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ttttaacaatagcaaatgtttttttcttcccctgtaacacacacactcactcacatgcac 350

                                                                       
Query: 183 acacatatgtactccaaactataaatgtgaagactgataaatatttattccatt-aaaaa 241
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 349 acacatatgtacaccaaactataaatgtgaagactgataaatatttattccattaaaaaa 290

                                                                       
Query: 242 attattaactgaaatggctataactgagaaatttaaacaaaagcctcatactagaagata 301
           | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 289 actattaactgaaatggctataactgagaaatttaaacaaaagccgcatactagaagata 230

                                                                       
Query: 302 tctgccactctttaaaagatttatgattttaatttgtgtatgactgtgtgtcagcatgtg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tctgccactctttaaaagatttatgattttaatttgtgtatgactgtgtgtcagcatgtg 170

                                                                       
Query: 362 caggcctgtggagaccagaagagggtgccagattccctggagctggagataaaggcactt 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 169 caggcctgtggagaccagaagagggtgccagattccctggagctggagatacaggcactt 110

                                                                       
Query: 422 gtggactttccaatgtgagtgctacgaaccaaactcattttctctgcaagaacagcaagt 481
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gtggacttttcaatgtgagtgctacgaaccaaactcattttctctgcaagaacagcaagt 50

                                                            
Query: 482 gctcttaatcactaaacagtctcataagccatctcatatacatctcata 530
           ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 49  gctcttaatcactaaacagtcgcataagccatctcatatacatctcata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1031
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1021
Effective search space:   630978
Effective search space used:   630978
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)