NNNCCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGGTAGTCATACTATACAGCAAGTTCTTTTATCTGTGGAG
TACCTTGCTGCTATTGCACAAGTAAGTGTGTGTCTGTGTGTGTGATTTTC
ATATATGCATGTACTGTATATTGGGCCTATCTCTGCCTCTCAATAGCATT
ATCCTTTCTTTTCTTTCCTCTTTCTCCCTCAGGACAGTTTTACTTTGTTC
ATGTCATCGAGACATTCATATTTTTATACATCTGCATAAAATGTAGGGAC
ACACGCACACCGAGTGAAACAAAATTAAAATGAAAAATGAAAACATGCAG
TCTTTTTGTTCAGTATTCATTAGCATATTCTTTTCTTTGATTTTTTAATA
CAATTCATGTATAATAATTAATGGTCAATCAGCTTGAAAAATTTCCTTAA
TGCTGATAATAGCTTTTTTATTGATATCCTTGTTGTTTTCATACATGTTA
TTATGCTATCTGCAGATAAAAATGGGTTACCTGTGCCTTTTTTATTCTTA
TACCTTTATATTAATAAGTGTCAACAAAAACCTTCAATAGATTATTGTAC
GCTAGAATATGGCCCAATGTCAACTTTTAATTCTTACTAGTGACAGAACT
TANAATATCACATTTGTCCATTCTGACCACAGCAGTATGCTTTCTATAAG
AGTGA

NNNCCGATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCATTAGATGGGGCTGAATTT
TCCTTCCTAACTTGAAGCACTGTTTCTGGATTTTCTTACATGAGGACTGC
ACAGGAAGTGACTCTCGGGTCTATATTTCAGGATTTTACAGAACGCTTAA
TGAAGCTTCCAGGTCACCCAACAAACTTAGTTTTGCCCAGGATTTCTTCA
CCTCCTTTTGTTCCTCAAACCAGAAGAAATGTCTAGAAGGAGCCTGTAGA
GTAGGAATTCTCAACCTGTGGGTCTCAACCCCTTGGGCATTGAATGACCC
ATTCACCTGAGTCGCCTAAGAGCATCGTAAAACAGATATTTACATTAAGA
TTTATAACAGTAGCAAAATTATAGCTATGAAGTAGCAACGAAAATAATTT
TATGGTTGAGGGTCACCACACCATTAGGAACTGTATCAAAGTGTCACAGT
GTTAGGACAGTTCAGAACCCGTGGTGTAGAGCAAAGACAGCTCTGCTAAA
TAAGGCAGGGGTTCTGTCTCACACTAACCCTCTCCATGGCTCTACCAGTT
TCTCTCTCATTCTTTCACTCAAAAGGTGTTAAAACCCCAAATATTCTAGG
AAGCTGGTCATCAGAGCCTGAGGCTCACCACCTAAGATGGAGACAAATTG
C

Query= MSMg01no117_b03.g1 MSMg01no117_b03.g1 CHROMAT_FILE:
MSMg01no117_b03.g1 PHD_FILE: MSMg01no117_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:30 2005
         (544 letters)



>mm_chr13_3314211_3315154
          Length = 944

 Score = 1021 bits (528), Expect = 0.0
 Identities = 540/544 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctctcattagatggggctgaattttccttcctaacttgaagcactgtttctggattttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 ctctcattagatggggctgaattttccttcctaacttgaagcactgtttctggattttca 260

                                                                       
Query: 61  tacatgaggactgcacaggaagtgactctcgggtctatatttcaggattttacagaacgc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tacatgaggactgcacaggaagtgactctcgggtctatatttcaggattttacagaacac 320

                                                                       
Query: 121 ttaatgaagcttccaggtcacccaacaaacttagttttgcccaggatttcttcacctcct 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ttaatgaagcttccaggtcacccaacaaacttagttttgcccaggattgcttcacctcct 380

                                                                       
Query: 181 tttgttcctcaaaccagaagaaatgtctagaaggagcctgtagagtaggaattctcaacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgttcctcaaaccagaagaaatgtctagaaggagcctgtagagtaggaattctcaacc 440

                                                                       
Query: 241 tgtgggtctcaaccccttgggcattgaatgacccattcacctgagtcgcctaagagcatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgggtctcaaccccttgggcattgaatgacccattcacctgagtcgcctaagagcatc 500

                                                                       
Query: 301 gtaaaacagatatttacattaagatttataacagtagcaaaattatagctatgaagtagc 360
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gtaaaacagatatttacattaagatttgtaacagtagcaaaattatagctatgaagtagc 560

                                                                       
Query: 361 aacgaaaataattttatggttgagggtcaccacaccattaggaactgtatcaaagtgtca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacgaaaataattttatggttgagggtcaccacaccattaggaactgtatcaaagtgtca 620

                                                                       
Query: 421 cagtgttaggacagttcagaacccgtggtgtagagcaaagacagctctgctaaataaggc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagtgttaggacagttcagaacccgtggtgtagagcaaagacagctctgctaaataaggc 680

                                                                       
Query: 481 aggggttctgtctcacactaaccctctccatggctctaccagtttctctctcattctttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggggttctgtctcacactaaccctctccatggctctaccagtttctctctcattctttc 740

               
Query: 541 actc 544
           ||||
Sbjct: 741 actc 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)