Query= MSMg01no117_i22.b1 MSMg01no117_i22.b1 CHROMAT_FILE:
MSMg01no117_i22.b1 PHD_FILE: MSMg01no117_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:09 2005
(608 letters)
>mm_chr13_59851237_59852244
Length = 1008
Score = 547 bits (283), Expect = e-160
Identities = 304/311 (97%), Gaps = 1/311 (0%)
Strand = Plus / Minus
Query: 298 aggaatactgacgtagcaccaaacctgatttcaaattacactacagagccatcatcataa 357
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1008 aggaatactgacgtagcaccaaacctgatttcaacttacactacagagccatcatcataa 949
Query: 358 aatcatcagagcacagtcaggagaggttacatagctcagtgggaaataactggcaaccca 417
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 948 aattatcagagcacagtcaggagaggttacatagatcagtgggaaataactggcaaccca 889
Query: 418 gacacaaatccataccaccacagctatgttttttagcaaaaatgaaaaaaaaaaaaaaga 477
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 888 gacacaaatccatacaaccacagctatgttttttggcaaaaatgaaaaaaaaaaaaa-ga 830
Query: 478 catggcagaaaaggtggcgtcgatgagggcttctggaaaacttgatccctccgttctcag 537
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 829 catggcagaaaaggtggcgtcgatgagggcttctggaaaacttgatccctctgttctcag 770
Query: 538 tgtcccagttagcagcgtctcctaaccaaaaccagctggggctcaagacgggaagatgaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tgtcccagttagcagcgtctcctaaccaaaaccagctggggctcaagacgggaagatgaa 710
Query: 598 gacctgaggag 608
|||||||||||
Sbjct: 709 gacctgaggag 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_i22.g1 MSMg01no117_i22.g1 CHROMAT_FILE:
MSMg01no117_i22.g1 PHD_FILE: MSMg01no117_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:09 2005
(491 letters)
>mm_chr13_59777213_59778101
Length = 889
Score = 891 bits (461), Expect = 0.0
Identities = 483/491 (98%), Gaps = 2/491 (0%)
Strand = Plus / Plus
Query: 1 ttaactctgacgatatttatcaatcattggttattgccatgcacggtcctaaattctgac 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaactctgacgatatttaccaatcattggttattgccatgcacggtcctaaattctgac 260
Query: 61 cctgaacactggtgtcaatcacacgttttaagcctccccgcccccccccccttttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 cctgaacactggtgtcaatcacacgttttaagcctccccgccccccccccc--ttttttt 318
Query: 121 ctttctcactccggtccccacttgctcaggcccttctaagtctccctttcttaatgcatg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctttctcactccggcccccacttgctcaggcccttctaagtctccctttcttaatgcatg 378
Query: 181 gcgagggttgtagaagaatctctctttcaaggcgtcccaattttcctctctaggtaagga 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gctagggttgtagaagaatctctctttcaaggcgtcccaattttcctctctaggtaagga 438
Query: 241 aacctgttctaccctgagcatttcttgaataaacaataaacacttgagcagtgactggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aacctgttctaccctgagcatttcttgaataaacaataaacacttgagcagtgactggaa 498
Query: 301 tcatgcatgtaatcccaacgctgagatggaaaatgttctctcttttgttttcccaagaga 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 499 tcatgcatgtaatcccaacgctgagatggaaaatgttctctattttgttttcccaagaga 558
Query: 361 caacttgtggttgtttggcttagaatgccccacccccaccccattacctgatacatttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 caacttgtggttgtttggcttagaatgccccacccccaccccattacctgatacatttga 618
Query: 421 atgtctgcttcctggttaatgaactgcttaagaaggactaggaggcgtggccttgttggg 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acgtctgcttcctggttaatgaactgcttaagaaggactaggaggcgtggccttgttggg 678
Query: 481 gtaggggtgtg 491
||||| |||||
Sbjct: 679 gtaggtgtgtg 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 889
Length adjustment: 10
Effective length of query: 481
Effective length of database: 879
Effective search space: 422799
Effective search space used: 422799
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
