Query= MSMg01no117_p12.b1 MSMg01no117_p12.b1 CHROMAT_FILE:
MSMg01no117_p12.b1 PHD_FILE: MSMg01no117_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:40 2005
(517 letters)
>mm_chr13_63790860_63791776
Length = 917
Score = 971 bits (502), Expect = 0.0
Identities = 511/514 (99%), Gaps = 1/514 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctgattgtc-cagggatgttaaaccagacacagagataatcgaggaatggct 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctcctgattgtcacagggatgttaaaccagacacagagataatcgaggaatggct 263
Query: 64 attaaggggctaaagaaagccaaaggtgacataattagctctgggcccacagcaccacaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attaaggggctaaagaaagccaaaggtgacataattagctctgggcccacagcaccacaa 323
Query: 124 ctttctcacagtcactgaagctccaatgaattaaccacttttgtagactcttcagtgcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttctcacagtcactgaagctccaatgaattaaccacttttgtagactcttcagtgcag 383
Query: 184 gtgagcctttctgggaacatcactcgcagaatgttgctagcatgtattcatagccagcct 243
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 gtgagcctttctgggaacatcactcgcagaatgttgctagcgtgtattcatagccagcct 443
Query: 244 tgagctttgtgactttttttcatgaacaccaacagttcatgttactctcatgtcaactgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgagctttgtgactttttttcatgaacaccaacagttcatgttactctcatgtcaactgg 503
Query: 304 cttcacagtggtttttactgaatgggatatggaaagtctacctcatctcccgctttcata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttcacagtggtttttactgaatgggatatggaaagtctacctcatctcccgctttcata 563
Query: 364 taagcttgcacacaaggctaacatggtgaatgtcaccctgaaacacaaagagctgcattg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taagcttgcacacaaggctaacatggtgaatgtcaccctgaaacacaaagagctgcattg 623
Query: 424 atgcacaaatatcaaggatgctgtggtactctctggtttcagtttcacagcactggtcat 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgcgcaaatatcaaggatgctgtggtactctctggtttcagtttcacagcactggtcat 683
Query: 484 atgtgagagctgaaataacaccaaatacctaagg 517
||||||||||||||||||||||||||||||||||
Sbjct: 684 atgtgagagctgaaataacaccaaatacctaagg 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_p12.g1 MSMg01no117_p12.g1 CHROMAT_FILE:
MSMg01no117_p12.g1 PHD_FILE: MSMg01no117_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:40 2005
(357 letters)
>mm_chr13_63946879_63947635
Length = 757
Score = 690 bits (357), Expect = 0.0
Identities = 357/357 (100%)
Strand = Plus / Minus
Query: 1 tttactctctacttacgttgtcacagcctggaagaaatgaacatattctaaagaaatact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttactctctacttacgttgtcacagcctggaagaaatgaacatattctaaagaaatact 498
Query: 61 tgtctctcaatctatcagactattgaaacaatagagtgcaagaaaatgggaattccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtctctcaatctatcagactattgaaacaatagagtgcaagaaaatgggaattccccca 438
Query: 121 ggaatctcacacagttctaacttgtcaaatcacatcacagactgaagcccaggcactgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggaatctcacacagttctaacttgtcaaatcacatcacagactgaagcccaggcactgat 378
Query: 181 gaatcagtggtgggcgggacctcactttgactgacactgcttacatgtgtacaccctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaatcagtggtgggcgggacctcactttgactgacactgcttacatgtgtacaccctctg 318
Query: 241 ccttctatttaaacttgatctcacttctggaccctgaagatgggcttgaggaatctgatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccttctatttaaacttgatctcacttctggaccctgaagatgggcttgaggaatctgatg 258
Query: 301 gacccttgtccctcttcccaacatagctgagctgaacaaatctcctttttctgcttt 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gacccttgtccctcttcccaacatagctgagctgaacaaatctcctttttctgcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
