Query= MSMg01no119_p13.b1 MSMg01no119_p13.b1 CHROMAT_FILE:
MSMg01no119_p13.b1 PHD_FILE: MSMg01no119_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:16 2005
(356 letters)
>mm_chr13_80499551_80500306
Length = 756
Score = 611 bits (316), Expect = e-179
Identities = 343/356 (96%), Gaps = 7/356 (1%)
Strand = Plus / Minus
Query: 1 tgtctccttatctggtagatattatctctgttctgtgtaggaggtaacttagactcatga 60
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 754 tgtctccttatctggtaggtattatctctgttctgtataggaggtaacttagactcatga 695
Query: 61 gcaattttgatggtatttgccatcattagtttggggtgagaatgcagtcacataccattt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gcaattttgatgatatttgccatcattagtttggggtgagaatgcagtcacataccattt 635
Query: 121 ccacacatgatttcaaagccgataattatttgtattttattcttttatctcaaaactgtt 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ccacacatgatttcaaagctgataattatttgtattttattcttttatctcaaaactgtt 575
Query: 181 gttttgcttggttaggttcactgcacattttatgtttcattttgaccattagaaatagga 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 574 gttttgcttggttaggtt-------cattttatgtttcattttgaccattagaaatagga 522
Query: 241 catgtaactatttatttattggtaattatgtacttgttattgagttgttaagatagtaat 300
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 catgtaactatttagtcattggtaattatgtacttgttattgagttgttaagatagtaat 462
Query: 301 ggctatgttttgtaaagattactcttcaagaaacatggacaagtatttaaatggta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggctatgttttgtaaagattactcttcaagaaacatggacaagtatttaaatggta 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_p13.g1 MSMg01no119_p13.g1 CHROMAT_FILE:
MSMg01no119_p13.g1 PHD_FILE: MSMg01no119_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:16 2005
(616 letters)
>mm_chr13_80360330_80361345
Length = 1016
Score = 1168 bits (604), Expect = 0.0
Identities = 613/616 (99%)
Strand = Plus / Plus
Query: 1 ttatctgttaaggaaaattaagctaattaaatcatttaggctaccaggaatctctacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatctgttaaggaaaattaagctaattaaatcatttaggctaccaggaatctctacaat 260
Query: 61 ttcttaagcacattggataatatagctcacatatattgactctcattttgctgtaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttaagcacattggataatatagctcacatatattgactctcattttgctgtaaaaga 320
Query: 121 ttctttttttctttaaattcataacctaaagtaaccacataccattcttctattacaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctttttttctttaaattcataacctaaagtaaccacataccattcttctattacaaag 380
Query: 181 atagcaaagtggaagagtactcttctcttgggaacgtactaacctaaatatttaactcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagcaaagtggaagagtactcttctcttgggaacgtactaacctaaatatttaactcta 440
Query: 241 atcaggtctttgcagaagattcttacatcacattaacctttacataattatccaatactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaggtctttgcagaagattcttacatcacattaacctttacataattatccaatactg 500
Query: 301 cataaaaggattattaaattcaaactccagttgataaaataaaaaaatggaggttaagta 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cataaaaggattattaaattgaaactccagttgataaaataaaaaaatggaggttaagta 560
Query: 361 tcttctaaaaaatactaaagtgaggtaaatattgccataaccctatttatgtaactctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttctaaaaaatactaaagtgaggtaaatattgccataaccctatttatgtaactctca 620
Query: 421 aaataaatatataagcagataatagaataagtttcactgttgttaatgatatatatcaaa 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 aaataaatatataagcagataatagaataagtttcaccgttgttaatgatatatatcaaa 680
Query: 481 ccacatttgctgtgttcctgtgtcatctccaggtatttttcacatatgcctttgatggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccacatttgctgtgttcctgtgtcatctccaggtatttttcacatatgcctttgatggtt 740
Query: 541 gcatgaataactcaataattaacaaatattgaactaatttactagaatagatttatttag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcatgaataactcaataattaacaaatattgaactaatttactagaatagatttatttag 800
Query: 601 ctcatggattctgagg 616
| ||||||||||||||
Sbjct: 801 cccatggattctgagg 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
